RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FSIP1Q8NA03 581 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 ERLEC1Q96DZ1 483 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 PLEKHA5Q9HAU0 1116 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 KMT5AQ9NQR1 393 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 ARHGAP28Q9P2N2 729 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 ARHGAP26Q9UNA1 814 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC3-203ENST00000467533 AK5Q9Y6K8 562 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 TTC26A0AVF1 554 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-203ENST00000467533 BTBD18B2RXH4 712 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 SLC28A2O43868 658 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 TOM1L1O75674 476 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 NOL4O94818 638 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 HDCP19113 662 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 NDUFV2P19404 249 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 KRT2P35908 639 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 EVCP57679 992 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 STRN3Q13033 797 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 STK3Q13188 491 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 NR5A1Q13285 461 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 DHCR24Q15392 516 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 ZBTB6Q15916 424 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 DDR2Q16832 855 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-203ENST00000467533 IL27RAQ6UWB1 636 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 ENGASEQ8NFI3 743 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
HDAC3-203ENST00000467533 ZNF419Q96HQ0 510 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-203ENST00000467533 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
HDAC3-203ENST00000467533 BHMT2Q9H2M3 363 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 CD93Q9NPY3 652 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 GCNT4Q9P109 453 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 BTBD3Q9Y2F9 522 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 PCDHGB2Q9Y5G2 931 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 TMEM131Q92545 1883 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 SPTA1P02549 2419 aa11.03□□□□□ -0.64
HDAC3-203ENST00000467533 ATMQ13315 3056 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 LACTBL1A8MY62 500 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 B8ZZF3 427 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 LEFTY2O00292 366 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 CYB561D2O14569 222 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 SCAMP3O14828 347 aaKnown RBP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 CLDN3O15551 220 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 TNFSF14O43557 240 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 ADH1CP00326 375 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 NTRK1P04629 796 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 CLTAP09496 248 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 ADH5P11766 374 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 PAX3P23760 479 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 RPA1P27694 616 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 HNF1BP35680 557 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 TNFSF9P41273 254 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 IL12RB1P42701 662 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 PDE6CP51160 858 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 RPL10AP62906 217 aaKnown RBP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 ATP2C1P98194 919 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 TSPY1Q01534 308 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 SUZ12Q15022 739 aaKnown RBP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 HLA-BQ31612 363 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 TMPRSS12Q86WS5 348 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 FMNL3Q8IVF7 1028 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 MTMR9Q96QG7 549 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 BRMS1Q9HCU9 246 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 RBM19Q9Y4C8 960 aaKnown RBP11.02□□□□□ -0.65
HDAC3-203ENST00000467533 SNX14Q9Y5W7 946 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 PTPN13Q12923 2485 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 SCN1AP35498 2009 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 MYOFQ9NZM1 2061 aa11.02□□□□□ -0.65
HDAC3-203ENST00000467533 MYH11P35749 1972 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 TBC1D3BA6NDS4 549 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 WNT7AO00755 349 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-203ENST00000467533 SLC16A4O15374 487 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 HIP1RO75146 1068 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 CDKL5O76039 1030 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 NTSR1P30989 418 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 MCL1Q07820 350 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 CCDC173Q0VFZ6 552 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 MYO1EQ12965 1108 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 NFE2Q16621 373 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-203ENST00000467533 C10orf76Q5T2E6 689 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 SPATA1Q5VX52 437 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 C9orf57Q5W0N0 161 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 HAUS3Q68CZ6 603 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 KIAA1324Q6UXG2 1013 aaKnown RBP11.01□□□□□ -0.65
HDAC3-203ENST00000467533 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
HDAC3-203ENST00000467533 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 BICD1Q96G01 975 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 MYRFLQ96LU7 910 aa11.01□□□□□ -0.65
HDAC3-203ENST00000467533 SEMA4CQ9C0C4 833 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms