RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 MRPL45Q9BRJ2 306 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 VRTNQ9H8Y1 702 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 TRPC7Q9HCX4 862 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 DUS2Q9NX74 493 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 ARHGAP26Q9UNA1 814 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
SOX2-OT-203ENST00000466034 MED19A0JLT2 244 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 C2orf78A6NCI8 922 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 EGFP01133 1207 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 PDGFRBP09619 1106 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ANXA13P27216 316 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 CASP1P29466 404 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ATICP31939 592 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 GNL1P36915 607 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 GRIK1P39086 918 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ME1P48163 572 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 IFNAR2P48551 515 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 CUL4BQ13620 913 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 LPAL2Q16609 132 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 KNOP1Q1ED39 458 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 EML3Q32P44 896 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ARL14EPQ8N8R7 260 aaPredicted RBP13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 GOLGA5Q8TBA6 731 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 ZNF516Q92618 1163 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 P2RY13Q9BPV8 354 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 RTKNQ9BST9 563 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 XYLT2Q9H1B5 865 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 TRPM5Q9NZQ8 1165 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 RCOR1Q9UKL0 485 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
SOX2-OT-203ENST00000466034 SPAG17Q6Q759 2223 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 KLRC4O43908 158 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 FOXD2O60548 495 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 OLFM2O95897 454 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 HDCP19113 662 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 GALK1P51570 392 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 AP3M2P53677 418 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 USP46P62068 366 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 TNNC1P63316 161 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CLDN10P78369 228 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 TRPC3Q13507 836 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 KCNB1Q14721 858 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CSRP2Q16527 193 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 HEATR6Q6AI08 1181 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CAMKK1Q8N5S9 505 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 OR6B3Q8NGW1 331 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CD101Q93033 1021 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 ELOVL4Q9GZR5 314 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 RALGAPA1Q6GYQ0 2036 aa13.29□□□□□ -0.28
SOX2-OT-203ENST00000466034 ATG2BQ96BY7 2078 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 MYO16Q9Y6X6 1858 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 ZNF840PA6NDX5 716 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 F8VP50 259 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 ACTN4O43707 911 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 EXOC3O60645 756 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 RNF40O75150 1001 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 AKAP3O75969 853 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 NFATC1O95644 943 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 AFMP43652 599 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 MYL6P60660 151 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 SLC7A9P82251 487 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 NR1H3Q13133 447 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 PSMD2Q13200 908 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 CEP68Q76N32 757 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 CEP57L1Q8IYX8 460 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 FAM160A2Q8N612 972 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 PLEKHO2Q8TD55 490 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 NETO1Q8TDF5 533 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 PARD3BQ8TEW8 1205 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 LOXL4Q96JB6 756 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 SEMA4GQ9NTN9 838 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms