RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 SGK1O00141 431 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 LEFTY2O00292 366 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
TRA2B-208ENST00000465245 IL18RAPO95256 599 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-208ENST00000465245 CYP17A1P05093 508 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 ITPKAP23677 461 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
TRA2B-208ENST00000465245 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
TRA2B-208ENST00000465245 GTF2BQ00403 316 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 CCDC142Q17RM4 750 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 SPDYCQ5MJ68 293 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 PROSER1Q86XN7 944 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 TMEM86AQ8N2M4 240 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 PGBD3Q8N328 593 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 CHCHD4Q8N4Q1 142 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 IL17RCQ8NAC3 791 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 FIZ1Q96SL8 496 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 PILRBQ9UKJ0 227 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
TRA2B-208ENST00000465245 BPTFQ12830 3046 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 OPHN1O60890 802 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 SEC24BO95487 1268 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 APODP05090 189 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 ITGB3P05106 788 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 HOXD12P35452 270 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 FAM193AP78312 1265 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 ZXDBP98169 803 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 RESTQ13127 1097 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 BYSLQ13895 437 aaKnown RBP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 DUOXA1Q1HG43 343 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 HSF5Q4G112 596 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 CRELD2Q6UXH1 353 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 SFTPA1Q8IWL2 248 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 ADGRF2Q8IZF7 708 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 CEP76Q8TAP6 659 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRA2B-208ENST00000465245 PNKPQ96T60 521 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 SLC6A14Q9UN76 642 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 STYXL1Q9Y6J8 313 aa12.89□□□□□ -0.35
TRA2B-208ENST00000465245 FAM221BA6H8Z2 402 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 AP5Z1O43299 807 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 HCRTO43612 131 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 KAT7O95251 611 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 PCSK1P29120 753 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 MAGEA11P43364 429 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 SLC6A11P48066 632 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 RPL6Q02878 288 aaKnown RBP12.88□□□□□ -0.35
TRA2B-208ENST00000465245 KDSRQ06136 332 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-208ENST00000465245 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 MCM6Q14566 821 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 DHCR24Q15392 516 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 ZNF423Q2M1K9 1284 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
TRA2B-208ENST00000465245 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 OSTM1Q86WC4 334 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 C1orf127Q8N9H9 656 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
TRA2B-208ENST00000465245 ACACAQ13085 2346 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-208ENST00000465245 SCAMP3O14828 347 aaKnown RBP12.87□□□□□ -0.35
TRA2B-208ENST00000465245 SLC26A4O43511 780 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 ADH1CP00326 375 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 SERPINF2P08697 491 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-208ENST00000465245 PFKLP17858 780 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 PLCG1P19174 1290 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
TRA2B-208ENST00000465245 UBA7P41226 1012 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 KIR2DL1P43626 348 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-208ENST00000465245 LHX1P48742 406 aa12.87□□□□□ -0.35
TRA2B-208ENST00000465245 WNT7BP56706 349 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms