RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 USP17L7P0C7H9 530 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 GNL1P36915 607 aaPredicted RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 CDH8P55286 799 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 DLG4P78352 724 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 SIM2Q14190 667 aaPredicted RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 KNOP1Q1ED39 458 aaKnown RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 TDRD10Q5VZ19 366 aaKnown RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 HS2ST1Q7LGA3 356 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 PAGE5Q96GU1 130 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 B3GNT5Q9BYG0 378 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 SDCBP2Q9H190 292 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 SNX25Q9H3E2 840 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 ECT2Q9H8V3 914 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 DUS2Q9NX74 493 aaKnown RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 ZMYM5Q9UJ78 669 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.07■■□□□ 1.28
EDEM1-205ENST00000465187 MYOFQ9NZM1 2061 aa23.07■■□□□ 1.28
EDEM1-205ENST00000465187 A0A1B0GVL5 298 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 PVALEFA0A1B0GWK0 134 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 LRRIQ3A6PVS8 624 aaPredicted RBP23.06■■□□□ 1.28
EDEM1-205ENST00000465187 PTPN1P18031 435 aaKnown RBP23.06■■□□□ 1.28
EDEM1-205ENST00000465187 CMA1P23946 247 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 PUM1Q14671 1186 aaKnown RBP eCLIP23.06■■□□□ 1.28
EDEM1-205ENST00000465187 EML3Q32P44 896 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 CC2D1AQ6P1N0 951 aaPredicted RBP23.06■■□□□ 1.28
EDEM1-205ENST00000465187 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 LONP2Q86WA8 852 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 OSCP1Q8WVF1 389 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 SPATA17Q96L03 361 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 RNF38Q9H0F5 515 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 GMEB2Q9UKD1 530 aa23.06■■□□□ 1.28
EDEM1-205ENST00000465187 EXOC3O60645 756 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 TACC1O75410 805 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 VNN1O95497 513 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 PRR29P0C7W0 189 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 PFKFB1P16118 471 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 HDCP19113 662 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 TNNC1P63316 161 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 FOXK2Q01167 660 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 IFRD2Q12894 506 aaPredicted RBP23.05■■□□□ 1.28
EDEM1-205ENST00000465187 KMT5BQ4FZB7 885 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 LAIR1Q6GTX8 287 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 VSTM1Q6UX27 236 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 C12orf56Q8IXR9 622 aa23.05■■□□□ 1.28
EDEM1-205ENST00000465187 SOBPA7XYQ1 873 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 SLFN14P0C7P3 912 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 GRSF1Q12849 480 aaKnown RBP eCLIP23.04■■□□□ 1.286e-10■■■□□ 16.6
EDEM1-205ENST00000465187 ORC1Q13415 861 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 KCNB1Q14721 858 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 PDGFRLQ15198 375 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 GAB4Q2WGN9 574 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 DENND5BQ6ZUT9 1274 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 WDR5BQ86VZ2 330 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 SYNPOQ8N3V7 929 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 FAM160A2Q8N612 972 aaPredicted RBP23.04■■□□□ 1.28
EDEM1-205ENST00000465187 P2RY13Q9BPV8 354 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 TTLL2Q9BWV7 592 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 KCTD10Q9H3F6 313 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 GDPD2Q9HCC8 539 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 RAB23Q9ULC3 237 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 SDK1Q7Z5N4 2213 aa23.04■■□□□ 1.28
EDEM1-205ENST00000465187 SPAG17Q6Q759 2223 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 A8MXQ7 604 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 IFNAR2P48551 515 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 ATXN1P54253 815 aaKnown RBP23.03■■□□□ 1.28
EDEM1-205ENST00000465187 TRPC3Q13507 836 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 CCDC6Q16204 474 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 SFTPA1Q8IWL2 248 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 CEP57L1Q8IYX8 460 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 PARD3BQ8TEW8 1205 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 SECISBP2LQ93073 1101 aaKnown RBP23.03■■□□□ 1.28
EDEM1-205ENST00000465187 HHIPQ96QV1 700 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 KCNK16Q96T55 309 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.03■■□□□ 1.28
EDEM1-205ENST00000465187 DMAC2Q9NW81 257 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 SMPD4Q9NXE4 827 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 HMGXB4Q9UGU5 601 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 ARHGAP26Q9UNA1 814 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 MYH10P35580 1976 aa23.03■■□□□ 1.28
EDEM1-205ENST00000465187 ZNF840PA6NDX5 716 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 LEFTY2O00292 366 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 PHACTR2O75167 634 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 C4BPAP04003 597 aaKnown RBP23.02■■□□□ 1.28
EDEM1-205ENST00000465187 ANXA13P27216 316 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 MESP2Q0VG99 397 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 TAF10Q12962 218 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 BIRC3Q13489 604 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 MAPRE1Q15691 268 aaKnown RBP23.02■■□□□ 1.28
EDEM1-205ENST00000465187 PAQR9Q6ZVX9 377 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.02■■□□□ 1.28
EDEM1-205ENST00000465187 CPA6Q8N4T0 437 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 FSIP1Q8NA03 581 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 B3GALNT2Q8NCR0 500 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 RPLP0P6Q8NHW5 317 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 C8orf48Q96LL4 319 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 HPSEQ9Y251 543 aa23.02■■□□□ 1.28
EDEM1-205ENST00000465187 FAM237AA0A1B0GTK4 181 aa23.01■■□□□ 1.27
EDEM1-205ENST00000465187 A0A1W2PQ27 194 aa23.01■■□□□ 1.27
EDEM1-205ENST00000465187 A0A1W2PQ64 194 aa23.01■■□□□ 1.27
EDEM1-205ENST00000465187 A0A1W2PQD8 194 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms