RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OPHN1O60890 802 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 KAT7O95251 611 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 HNRNPLP14866 589 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMC1A-204ENST00000463684 ITPKAP23677 461 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 MAGEA11P43364 429 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 SLC6A11P48066 632 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 HNRNPDQ14103 355 aaKnown RBP15.5■□□□□ 0.07
SMC1A-204ENST00000463684 MCM6Q14566 821 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 DHCR24Q15392 516 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 ZNF423Q2M1K9 1284 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 RABEPKQ7Z6M1 372 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 FILIP1Q7Z7B0 1213 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 CHCHD4Q8N4Q1 142 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 LRRC52Q8N7C0 313 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 FRMD1Q8N878 549 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 KIAA1958Q8N8K9 716 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 FIZ1Q96SL8 496 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 PKMYT1Q99640 499 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 ST6GALNAC4Q9H4F1 302 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 EHD2Q9NZN4 543 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 MAGEC2Q9UBF1 373 aaPredicted RBP15.5■□□□□ 0.07
SMC1A-204ENST00000463684 R3HCC1Q9Y3T6 440 aaKnown RBP15.5■□□□□ 0.07
SMC1A-204ENST00000463684 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 SNX9Q9Y5X1 595 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 AKAP13Q12802 2813 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ABCA7Q8IZY2 2146 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 IGF2RP11717 2491 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 TCRBV21S2A2A0A5A6 115 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 FAM221BA6H8Z2 402 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 CYP17A1P05093 508 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 KRT19P08727 400 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 GRIK1P39086 918 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 EIF2DP41214 584 aaKnown RBP15.49■□□□□ 0.07
SMC1A-204ENST00000463684 GRIA2P42262 883 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 TNFRSF4P43489 277 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ZXDBP98169 803 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 RESTQ13127 1097 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 GAB4Q2WGN9 574 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 MAP7D1Q3KQU3 841 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 EMC10Q5UCC4 262 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 VSTM1Q6UX27 236 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ADGRF2Q8IZF7 708 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 TOP6BLQ8N6T0 577 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 C1orf127Q8N9H9 656 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 KRI1Q8N9T8 703 aaKnown RBP15.49■□□□□ 0.07
SMC1A-204ENST00000463684 SPATA17Q96L03 361 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 CEP295NLQ96MC4 621 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 FAM213AQ9BRX8 229 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ARHGEF4Q9NR80 690 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 GDAP2Q9NXN4 497 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ITGA11Q9UKX5 1188 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 MYH11P35749 1972 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 ZNF638Q14966 1978 aaKnown RBP15.49■□□□□ 0.07
SMC1A-204ENST00000463684 THADAQ6YHU6 1953 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 DMXL2Q8TDJ6 3036 aa15.49■□□□□ 0.07
SMC1A-204ENST00000463684 NUP205Q92621 2012 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 A0A0A0MRY4 1105 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 GABRDO14764 452 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 SEC24BO95487 1268 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 ADH1CP00326 375 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 LDHAP00338 332 aaKnown RBP15.48■□□□□ 0.07
SMC1A-204ENST00000463684 SERPINF2P08697 491 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 PLCG1P19174 1290 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 ANXA13P27216 316 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 PPP3CCP48454 512 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 RBP5P82980 135 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 RPL6Q02878 288 aaKnown RBP15.48■□□□□ 0.07
SMC1A-204ENST00000463684 MAPRE1Q15691 268 aaKnown RBP15.48■□□□□ 0.07
SMC1A-204ENST00000463684 PEAR1Q5VY43 1037 aaPredicted RBP15.48■□□□□ 0.07
SMC1A-204ENST00000463684 FAM171BQ6P995 826 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 SLC36A4Q6YBV0 504 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 DENND5BQ6ZUT9 1274 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 ZNF720Q7Z2F6 126 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 PROSER1Q86XN7 944 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 SFTPA1Q8IWL2 248 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 RAD54LQ92698 747 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 EXOC7Q9UPT5 735 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 SCN1AP35498 2009 aa15.48■□□□□ 0.07
SMC1A-204ENST00000463684 DENND4CQ5VZ89 1909 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 ZFYVE26Q68DK2 2539 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.47■□□□□ 0.07
SMC1A-204ENST00000463684 ZBTB24O43167 697 aaPredicted RBP15.47■□□□□ 0.07
SMC1A-204ENST00000463684 ABL1P00519 1130 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 BDNFP23560 247 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 ADSSP30520 456 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 KIR2DL1P43626 348 aaPredicted RBP15.47■□□□□ 0.07
SMC1A-204ENST00000463684 SLC7A9P82251 487 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 CCDC142Q17RM4 750 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 PREPLQ4J6C6 727 aaPredicted RBP15.47■□□□□ 0.07
SMC1A-204ENST00000463684 RHBDF2Q6PJF5 856 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 NUDT18Q6ZVK8 323 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 DPH6Q7L8W6 267 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 TRMT11Q7Z4G4 463 aaKnown RBP15.47■□□□□ 0.07
SMC1A-204ENST00000463684 MINDY1Q8N5J2 469 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 DEFB119Q8N690 84 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 LARP4BQ92615 738 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms