RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 CXorf38Q8TB03 319 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 PCED1BQ96HM7 432 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
RPA3-206ENST00000463632 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 ARHGAP26Q9UNA1 814 aa13.15□□□□□ -0.3
RPA3-206ENST00000463632 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 A8MXQ7 604 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 LEFTY2O00292 366 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 MBL2P11226 248 aaPredicted RBP13.14□□□□□ -0.31
RPA3-206ENST00000463632 USP46P62068 366 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 PLK5Q496M5 336 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
RPA3-206ENST00000463632 STPG1Q5TH74 334 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 RNF43Q68DV7 783 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
RPA3-206ENST00000463632 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 NACA2Q9H009 215 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 BLZF1Q9H2G9 400 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 VPS45Q9NRW7 570 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 RXFP3Q9NSD7 469 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 CPQQ9Y646 472 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 MYH11P35749 1972 aa13.14□□□□□ -0.31
RPA3-206ENST00000463632 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
RPA3-206ENST00000463632 CLDN5O00501 218 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPA3-206ENST00000463632 EXOC3O60645 756 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 AKAP3O75969 853 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 CAVIN2O95810 425 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 CST3P01034 146 aaPredicted RBP13.13□□□□□ -0.31
RPA3-206ENST00000463632 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
RPA3-206ENST00000463632 AFMP43652 599 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 RAP1GAPP47736 663 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
RPA3-206ENST00000463632 TAF10Q12962 218 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 TCEAL6Q6IPX3 200 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 XXYLT1Q8NBI6 393 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 TCEAL3Q969E4 200 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 CGRRF1Q99675 332 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPA3-206ENST00000463632 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 PCDHGA5Q9Y5G8 931 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 WDR87Q6ZQQ6 2873 aa13.13□□□□□ -0.31
RPA3-206ENST00000463632 CACNA1AO00555 2505 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 SLC9A3R1O14745 358 aaPredicted RBP13.12□□□□□ -0.31
RPA3-206ENST00000463632 POLR2DO15514 142 aaKnown RBP13.12□□□□□ -0.31
RPA3-206ENST00000463632 MAP3K13O43283 966 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 CUTAO60888 179 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 KRT37O76014 449 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ALDH1A2O94788 518 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 CASP1P29466 404 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ME1P48163 572 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 PPP3CCP48454 512 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 DHPSP49366 369 aaPredicted RBP13.12□□□□□ -0.31
RPA3-206ENST00000463632 MYL6P60660 151 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 CYP24A1Q07973 514 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 PSMD6Q15008 389 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 PGBD3Q8N328 593 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
RPA3-206ENST00000463632 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ZNF518BQ9C0D4 1074 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ELOVL4Q9GZR5 314 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 DUSP15Q9H1R2 295 aaPredicted RBP13.12□□□□□ -0.31
RPA3-206ENST00000463632 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 DCHS1Q96JQ0 3298 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 DMXL1Q9Y485 3027 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
RPA3-206ENST00000463632 COL4A2P08572 1712 aa13.11□□□□□ -0.31
RPA3-206ENST00000463632 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
RPA3-206ENST00000463632 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
RPA3-206ENST00000463632 PPP6R2O75170 966 aa13.11□□□□□ -0.31
RPA3-206ENST00000463632 TACC1O75410 805 aa13.11□□□□□ -0.31
RPA3-206ENST00000463632 KLF8O95600 359 aaPredicted RBP13.11□□□□□ -0.31
RPA3-206ENST00000463632 ADH1CP00326 375 aa13.11□□□□□ -0.31
RPA3-206ENST00000463632 APODP05090 189 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms