RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 NCDNQ9UBB6 729 aa20.58■□□□□ 0.89
TSC2-209ENST00000463601 MAGEC2Q9UBF1 373 aaPredicted RBP20.58■□□□□ 0.89
TSC2-209ENST00000463601 HELZP42694 1942 aaKnown RBP20.58■□□□□ 0.88
TSC2-209ENST00000463601 CACNA1AO00555 2505 aa20.58■□□□□ 0.88
TSC2-209ENST00000463601 C2orf78A6NCI8 922 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 USP46P62068 366 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 CYP27A1Q02318 531 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 RUNX3Q13761 415 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 LPAL2Q16609 132 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 MDH1BQ5I0G3 518 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 DGKKQ5KSL6 1271 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 CEP135Q66GS9 1140 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 PKN3Q6P5Z2 889 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 C4orf50Q6ZRC1 276 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 TTC16Q8NEE8 873 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 ELMO3Q96BJ8 720 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 PCED1BQ96HM7 432 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 DPEP3Q9H4B8 488 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 UXTQ9UBK9 157 aaPredicted RBP20.57■□□□□ 0.88
TSC2-209ENST00000463601 FRMD4BQ9Y2L6 1034 aa20.57■□□□□ 0.88
TSC2-209ENST00000463601 LRRIQ3A6PVS8 624 aaPredicted RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 SOBPA7XYQ1 873 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 CHURC1-FNTBB4DL54 471 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 K7ESF4 209 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 AKAP3O75969 853 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 RPL13P26373 211 aaKnown RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 GNL1P36915 607 aaPredicted RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 GRIK1P39086 918 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 FNTBP49356 437 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 MYL6P60660 151 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 WDR72Q3MJ13 1102 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 ARL14EPQ8N8R7 260 aaPredicted RBP20.56■□□□□ 0.88
TSC2-209ENST00000463601 MYCBPAPQ8TBZ2 947 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 TMC2Q8TDI7 906 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 XYLT2Q9H1B5 865 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 KIF9Q9HAQ2 790 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 GCNT4Q9P109 453 aa20.56■□□□□ 0.88
TSC2-209ENST00000463601 TACC1O75410 805 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 CKMP06732 381 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 BMP6P22004 513 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 AP3M2P53677 418 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 CACNA2D1P54289 1103 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 NRLP54845 237 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 DLG4P78352 724 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 SRSF5Q13243 272 aaKnown RBP20.55■□□□□ 0.88
TSC2-209ENST00000463601 ADAM9Q13443 819 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 PPP2R5DQ14738 602 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 ZNF77Q15935 545 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 HEATR6Q6AI08 1181 aaKnown RBP20.55■□□□□ 0.88
TSC2-209ENST00000463601 FSTL4Q6MZW2 842 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 OR6B3Q8NGW1 331 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 SNX25Q9H3E2 840 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 FBRSL1Q9HCM7 1045 aaKnown RBP20.55■□□□□ 0.88
TSC2-209ENST00000463601 TMEM30AQ9NV96 361 aa20.55■□□□□ 0.88
TSC2-209ENST00000463601 NXF1Q9UBU9 619 aaKnown RBP20.55■□□□□ 0.88
TSC2-209ENST00000463601 MYO16Q9Y6X6 1858 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 TRAV19A0A0A6YYK7 116 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 HRO43593 1189 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 C4BPAP04003 597 aaKnown RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 CD44P16070 742 aaKnown RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 PMS1P54277 932 aaKnown RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 TNNC1P63316 161 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 TRPC3Q13507 836 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 MORC3Q14149 939 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 MTF1Q14872 753 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 TMEM196Q5HYL7 178 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 C1orf220Q5T0J3 134 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 TDRD10Q5VZ19 366 aaKnown RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 ISM2Q6H9L7 571 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 CC2D1AQ6P1N0 951 aaPredicted RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 VSTM1Q6UX27 236 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 ZC3H3Q8IXZ2 948 aaKnown RBP20.54■□□□□ 0.88
TSC2-209ENST00000463601 SPATA17Q96L03 361 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 WNT6Q9Y6F9 365 aa20.54■□□□□ 0.88
TSC2-209ENST00000463601 F8VP50 259 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 IKBKBO14920 756 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 PAPSS2O95340 614 aaPredicted RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 USP17L7P0C7H9 530 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 PTPN1P18031 435 aaKnown RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 PSMC2P35998 433 aaKnown RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 MCCD1P59942 119 aaPredicted RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 ZXDBP98169 803 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 ENPEPQ07075 957 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 USP4Q13107 963 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 MAPRE1Q15691 268 aaKnown RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 ANKRD40Q6AI12 368 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 INTS8Q75QN2 995 aaKnown RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 FAM186BQ8IYM0 893 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 SMYD3Q9H7B4 428 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 LMBRD1Q9NUN5 540 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 POLR3BQ9NW08 1133 aaPredicted RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 DUS2Q9NX74 493 aaKnown RBP20.53■□□□□ 0.88
TSC2-209ENST00000463601 SDK1Q7Z5N4 2213 aa20.53■□□□□ 0.88
TSC2-209ENST00000463601 CLDN5O00501 218 aa20.52■□□□□ 0.88
TSC2-209ENST00000463601 TRDMT1O14717 391 aaKnown RBP20.52■□□□□ 0.88
TSC2-209ENST00000463601 STAU1O95793 577 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms