RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 KIF26AQ9ULI4 1882 aaPredicted RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 AP1G2O75843 785 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 FAM200BP0CF97 657 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PTMSP20962 102 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 GCNT1Q02742 428 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 ARHGAP17Q68EM7 881 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 HFE2Q6ZVN8 426 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 CMTM8Q8IZV2 173 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 CELF5Q8N6W0 485 aaKnown RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 UBR7Q8N806 425 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 TATDN2Q93075 761 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 TMEM176AQ96HP8 235 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PRRX2Q99811 253 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 RPP25Q9BUL9 199 aaKnown RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 TRMT61BQ9BVS5 477 aaKnown RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 KRT82Q9NSB4 513 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 ZNF638Q14966 1978 aaKnown RBP13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 CLDN5O00501 218 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 DPYSL4O14531 572 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 TCF3P15923 654 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 CD58P19256 250 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 CLCN5P51795 746 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 CYP4F8P98187 520 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 FCHO2Q0JRZ9 810 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 VITQ6UXI7 678 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 LMO3Q8TAP4 145 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 SLC2A14Q8TDB8 520 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 IRF7Q92985 503 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 TWNKQ96RR1 684 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 UBXN6Q9BZV1 441 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 SMOC2Q9H3U7 446 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 ANAPC1Q9H1A4 1944 aa13.85□□□□□ -0.19
R3HDM1-213ENST00000463230 TRAV19A0A0A6YYK7 116 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 FAM92AA1XBS5 289 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 HEPACAM2A8MVW5 462 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 TADA3O75528 432 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 PAEPP09466 180 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 USP17L7P0C7H9 530 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 GLULP15104 373 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 YWHAQP27348 245 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 AVPR1AP37288 418 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 RAD23BP54727 409 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 GPC5P78333 572 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 C1orf228Q6PIY5 440 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 IRF2BP1Q8IU81 584 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 YAF2Q8IY57 180 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 ENOX1Q8TC92 643 aaKnown RBP13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 SLC46A2Q9BY10 475 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 PLA2G2FQ9BZM2 168 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 MFSD1Q9H3U5 465 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 ARHGEF3Q9NR81 526 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 C5orf42Q9H799 3197 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 TNFRSF10BO14763 440 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 CHADO15335 359 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 LRRN2O75325 713 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 CFHP08603 1231 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 CCDC130P13994 396 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 MTIF2P46199 727 aaKnown RBP13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 STX1AQ16623 288 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 STXBP5Q5T5C0 1151 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 SLC4A11Q8NBS3 891 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.84□□□□□ -0.196e-11■■■■■ 47.9
R3HDM1-213ENST00000463230 FAM49BQ9NUQ9 324 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
R3HDM1-213ENST00000463230 ZNF263O14978 683 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 COL4A2P08572 1712 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 TUBP50607 506 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 CDR1P51861 262 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 CACNA2D1P54289 1103 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 STARD6P59095 220 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 MLF2Q15773 248 aaPredicted RBP13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 SIX5Q8N196 739 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 BPIFB1Q8TDL5 484 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 HEXIM2Q96MH2 286 aaKnown RBP13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 SMOQ99835 787 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 ARID3AQ99856 593 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 INTS2Q9H0H0 1204 aaKnown RBP13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 BRD9Q9H8M2 597 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 TMEM30AQ9NV96 361 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 HELZP42694 1942 aaKnown RBP13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 MYH10P35580 1976 aa13.83□□□□□ -0.2
R3HDM1-213ENST00000463230 NPR3P17342 541 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms