RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CAVIN2O95810 425 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 BDNFP23560 247 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 ANXA13P27216 316 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 DGKEP52429 567 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 PSMC1P62191 440 aaKnown RBP21.14■□□□□ 0.97
VARS-221ENST00000463184 CREB5Q02930 508 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 CEBPZQ03701 1054 aaKnown RBP21.14■□□□□ 0.97
VARS-221ENST00000463184 USP39Q53GS9 565 aaKnown RBP21.14■□□□□ 0.97
VARS-221ENST00000463184 TSTD1Q8NFU3 115 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 OR5B17Q8NGF7 314 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 CRTAC1Q9NQ79 661 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 ANAPC1Q9H1A4 1944 aa21.14■□□□□ 0.97
VARS-221ENST00000463184 BCLAF3A2AJT9 711 aaKnown RBP21.13■□□□□ 0.97
VARS-221ENST00000463184 TRIM66O15016 1216 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 KCNK5O95279 499 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 WARSP23381 471 aaKnown RBP21.13■□□□□ 0.97
VARS-221ENST00000463184 PPP3CCP48454 512 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 RESTQ13127 1097 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 USP33Q8TEY7 942 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 KIAA1586Q9HCI6 787 aa21.13■□□□□ 0.97
VARS-221ENST00000463184 MAP1BP46821 2468 aaKnown RBP21.13■□□□□ 0.97
VARS-221ENST00000463184 PTPRJQ12913 1337 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 A0A087X0B3 334 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 K7EQS6 105 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 LEFTY2O00292 366 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 PDGFRBP09619 1106 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 GBP1P32455 592 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 OPRD1P41143 372 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 SLC7A9P82251 487 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 ZXDBP98169 803 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 CYP27A1Q02318 531 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 SLC39A14Q15043 492 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 TCEAL6Q6IPX3 200 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 FAM173BQ6P4H8 233 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 CBWD2Q8IUF1 395 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 WDR49Q8IV35 697 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 MYCBPAPQ8TBZ2 947 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 TCEAL3Q969E4 200 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 MMS19Q96T76 1030 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 EDEM2Q9BV94 578 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 TTLL2Q9BWV7 592 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 LRRC27Q9C0I9 530 aa21.12■□□□□ 0.97
VARS-221ENST00000463184 LAMA1P25391 3075 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 CHD8Q9HCK8 2581 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 FAM163BP0C2L3 166 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 ANP32AP39687 249 aaKnown RBP21.11■□□□□ 0.97
VARS-221ENST00000463184 USP46P62068 366 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 NOP14P78316 857 aaKnown RBP21.11■□□□□ 0.97
VARS-221ENST00000463184 RASSF3Q86WH2 238 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 ADGRG2Q8IZP9 1017 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 PCED1BQ96HM7 432 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 C8orf48Q96LL4 319 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 ZSCAN16Q9H4T2 348 aaPredicted RBP21.11■□□□□ 0.97
VARS-221ENST00000463184 HSPBP1Q9NZL4 362 aa21.11■□□□□ 0.97
VARS-221ENST00000463184 ZNF840PA6NDX5 716 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 SLC9A3R1O14745 358 aaPredicted RBP21.1■□□□□ 0.97
VARS-221ENST00000463184 GNL1P36915 607 aaPredicted RBP21.1■□□□□ 0.97
VARS-221ENST00000463184 SEC13P55735 322 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 C2orf27AQ580R0 203 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 PMS2CLQ68D20 193 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 TRAPPC11Q7Z392 1133 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 PDILTQ8N807 584 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 CNOT6LQ96LI5 555 aaKnown RBP21.1■□□□□ 0.97
VARS-221ENST00000463184 USP28Q96RU2 1077 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 TNMDQ9H2S6 317 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 SNX25Q9H3E2 840 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 MMP17Q9ULZ9 603 aa21.1■□□□□ 0.97
VARS-221ENST00000463184 MYO16Q9Y6X6 1858 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 C4orf47A7E2U8 309 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 TACC1O75410 805 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 OLFM2O95897 454 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 MRPS21P82921 87 aaKnown RBP21.09■□□□□ 0.97
VARS-221ENST00000463184 CRY1Q16526 586 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 GAB4Q2WGN9 574 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 DAB2IPQ5VWQ8 1189 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 RNF38Q9H0F5 515 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 INVSQ9Y283 1065 aa21.09■□□□□ 0.97
VARS-221ENST00000463184 KIAA1549LQ6ZVL6 1849 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 F8VP50 259 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 KHNYNO15037 678 aaKnown RBP21.08■□□□□ 0.97
VARS-221ENST00000463184 EIF3DO15371 548 aaKnown RBP eCLIP21.08■□□□□ 0.97
VARS-221ENST00000463184 CYP17A1P05093 508 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 EIF2DP41214 584 aaKnown RBP21.08■□□□□ 0.97
VARS-221ENST00000463184 DHCR24Q15392 516 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 MDH1BQ5I0G3 518 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 TDRD10Q5VZ19 366 aaKnown RBP21.08■□□□□ 0.97
VARS-221ENST00000463184 ANO7Q6IWH7 933 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 PSAPL1Q6NUJ1 521 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 HS2ST1Q7LGA3 356 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 GLIS3Q8NEA6 775 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 OR6B3Q8NGW1 331 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 SLITRK1Q96PX8 696 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 FNBP1Q96RU3 617 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 MRPL45Q9BRJ2 306 aaKnown RBP21.08■□□□□ 0.97
VARS-221ENST00000463184 TPSD1Q9BZJ3 242 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 CPQQ9Y646 472 aa21.08■□□□□ 0.97
VARS-221ENST00000463184 HELZP42694 1942 aaKnown RBP21.08■□□□□ 0.96
VARS-221ENST00000463184 ABCA7Q8IZY2 2146 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 LNP1A1A4G5 178 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms