RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 GBA2Q9HCG7 927 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 LUC7LQ9NQ29 371 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 FAM237AA0A1B0GTK4 181 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 SYCE3A1L190 88 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 EDIL3O43854 480 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 NOBOXO60393 691 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 NEMFO60524 1076 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 KINO60870 393 aaKnown RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 ZNF202O95125 648 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 CLEC2LP0C7M8 214 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 ALAS1P13196 640 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 PFKFB1P16118 471 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 HOXA7P31268 230 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 HOXA13P31271 388 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 SYKP43405 635 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 NFATC3Q12968 1075 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 TOP3AQ13472 1001 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 PDCD1Q15116 288 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 CAMK4Q16566 473 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 SPECC1Q5M775 1068 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 TREML2Q5T2D2 321 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 GRAMD4Q6IC98 578 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 PPP4R3AQ6IN85 833 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 FRMD7Q6ZUT3 714 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 ESPNLQ6ZVH7 1005 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 KANSL1Q7Z3B3 1105 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 ZDHHC14Q8IZN3 488 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 REPS2Q8NFH8 660 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 MBD6Q96DN6 1003 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 LCORQ96JN0 433 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-204ENST00000462658 KCNC2Q96PR1 638 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 TMEM60Q9H2L4 133 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 TNMDQ9H2S6 317 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 CLSTN2Q9H4D0 955 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 HPSEQ9Y251 543 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 PTPN22Q9Y2R2 807 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 MYPNQ86TC9 1320 aa8.18□□□□□ -1.1
UBE4B-204ENST00000462658 MROH6A6NGR9 719 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 ATP2A1O14983 1001 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 CTAGE5O15320 804 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 TDP2O95551 362 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 OR52Z1P0C646 297 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 ZNF888P0CJ79 500 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 GCFC2P16383 781 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 LONP1P36776 959 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 SREBF1P36956 1147 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 PRPHP41219 470 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 STAT5BP51692 787 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 OAZ1P54368 228 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 GJA9P57773 515 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 IRX3P78415 501 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 SNAPC2Q13487 334 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 IL17AQ16552 155 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 CALCRLQ16602 461 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 TMEM200BQ69YZ2 307 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 KIAA1841Q6NSI8 718 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 CXorf67Q86X51 503 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 SAMD3Q8N6K7 520 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 P2RX7Q99572 595 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 MAP3K20Q9NYL2 800 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 USP36Q9P275 1121 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 DDX25Q9UHL0 483 aaKnown RBP8.17□□□□□ -1.1
UBE4B-204ENST00000462658 PHIPQ8WWQ0 1821 aa8.17□□□□□ -1.1
UBE4B-204ENST00000462658 CYP3A7-CYP3A51PA0A087WV96 503 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 A0A0G2JNJ9 132 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 PRSS38A1L453 326 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 GOLGA6L3A6NEY3 463 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 SLC37A4O43826 429 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 MARCH6O60337 910 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 CYP3A4P08684 503 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 CYP3A7P24462 503 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 CSF2RBP32927 897 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 HSD17B4P51659 736 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 RRADP55042 308 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 GHRHRQ02643 423 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 PLS1Q14651 629 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 SNRNP48Q6IEG0 339 aaKnown RBP8.16□□□□□ -1.1
UBE4B-204ENST00000462658 MOXD1Q6UVY6 613 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 USP49Q70CQ1 688 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 LARP4Q71RC2 724 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBE4B-204ENST00000462658 GAS2L3Q86XJ1 694 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 BCL6BQ8N143 479 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-204ENST00000462658 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 MB21D1Q8N884 522 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 CRYGNQ8WXF5 182 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 TIGD1Q96MW7 591 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 MBOAT7Q96N66 472 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 MTMR9Q96QG7 549 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms