RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 DRD1P21728 446 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 HOXA6P31267 233 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
COL11A1-206ENST00000461720 ARHGAP8P85298 464 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 LMNB2Q03252 620 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 KMT5BQ4FZB7 885 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 TDRD10Q5VZ19 366 aaKnown RBP13.4□□□□□ -0.26
COL11A1-206ENST00000461720 CEP68Q76N32 757 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 B3GALNT2Q8NCR0 500 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 CCDC26Q8TAB7 109 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 SH3RF2Q8TEC5 729 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 PARD3BQ8TEW8 1205 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 TNIP3Q96KP6 325 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 P2RY13Q9BPV8 354 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 ECT2Q9H8V3 914 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 SLC8A2Q9UPR5 921 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 OBSL1O75147 1896 aa13.4□□□□□ -0.26
COL11A1-206ENST00000461720 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-206ENST00000461720 F8VP50 259 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 K7ESF4 209 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 PDXKO00764 312 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 KLRC4O43908 158 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 NFATC1O95644 943 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 ABL1P00519 1130 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
COL11A1-206ENST00000461720 GJA4P35212 333 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 CASP4P49662 377 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 GALK1P51570 392 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 STK4Q13043 487 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 USP4Q13107 963 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 ZNF77Q15935 545 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 LPAL2Q16609 132 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 FSTL4Q6MZW2 842 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-206ENST00000461720 SLC9A9Q8IVB4 645 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 MED10Q9BTT4 135 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 ARHGAP26Q9UNA1 814 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
COL11A1-206ENST00000461720 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-206ENST00000461720 HRO43593 1189 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 CALUO43852 315 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 LRP3O75074 770 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 NR3C1P04150 777 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 RPN1P04843 607 aaKnown RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 RETP07949 1114 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 TCF3P15923 654 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 SYKP43405 635 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 USP46P62068 366 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 CLDN10P78369 228 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 DMWDQ09019 674 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 NCOA4Q13772 614 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 SGSM1Q2NKQ1 1148 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 WDR5BQ86VZ2 330 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 CD101Q93033 1021 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 CCDC34Q96HJ3 373 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 SCAND2PQ9GZW5 306 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 XYLT2Q9H1B5 865 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 DPEP3Q9H4B8 488 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 CDV3Q9UKY7 258 aaKnown RBP13.38□□□□□ -0.27
COL11A1-206ENST00000461720 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
COL11A1-206ENST00000461720 ZNF840PA6NDX5 716 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-206ENST00000461720 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-206ENST00000461720 RNF40O75150 1001 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 EGFP01133 1207 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 YWHAQP27348 245 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 IFRD2Q12894 506 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-206ENST00000461720 TAF10Q12962 218 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 EML3Q32P44 896 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL11A1-206ENST00000461720 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 CAMKK1Q8N5S9 505 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 RIN3Q8TB24 985 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 TMC2Q8TDI7 906 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 TAF4BQ92750 862 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 ACDQ96AP0 544 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 B3GNT5Q9BYG0 378 aa13.37□□□□□ -0.27
COL11A1-206ENST00000461720 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms