RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 MC4RP32245 332 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 SCNN1BP51168 640 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 BACE1P56817 501 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 JAM2P57087 298 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 AKAP17AQ02040 695 aaKnown RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 MAP2K1Q02750 393 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 SREBF2Q12772 1141 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 CCL15Q16663 113 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ABCB5Q2M3G0 1257 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 KIAA1755Q5JYT7 1200 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 GALNT17Q6IS24 598 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ERAP2Q6P179 960 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 UBE2R2Q712K3 238 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ANKRD23Q86SG2 305 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 TPH2Q8IWU9 490 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 MB21D2Q8IYB1 491 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 SMAP1Q8IYB5 467 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 FAM43AQ8N2R8 423 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 AMER2Q8N7J2 671 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ACER1Q8TDN7 264 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 CCDC12Q8WUD4 166 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 LPAR1Q92633 364 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 PLEKHG4BQ96PX9 1271 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 R3HDMLQ9H3Y0 253 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 ZHX3Q9H4I2 956 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 IL17RBQ9NRM6 502 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 AURKAIP1Q9NWT8 199 aaPredicted RBP6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 RNF186Q9NXI6 227 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 Q9UFV3 132 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
THUMPD3-207ENST00000461636 PLXNB2O15031 1838 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 NID2Q14112 1375 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 SMCHD1A6NHR9 2005 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 B4E1Z4 1266 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 ZBTB43O43298 467 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 PFKFB2O60825 505 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 PRDM1O75626 825 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 MYL3P08590 195 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 C6orf222P0C671 652 aaPredicted RBP6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 HSPA8P11142 646 aaKnown RBP6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 HOXA7P31268 230 aaPredicted RBP6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 MSX2P35548 267 aaPredicted RBP6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 MRE11P49959 708 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 DNM2P50570 870 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TFAP4Q01664 338 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 SPP2Q13103 211 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 CUL4AQ13619 759 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TBR1Q16650 682 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 ASPRV1Q53RT3 343 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TREML2Q5T2D2 321 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TMEM200BQ69YZ2 307 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 STOX1Q6ZVD7 989 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 FGD2Q7Z6J4 655 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 CPXCR1Q8N123 301 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 ZNF808Q8N4W9 903 aaPredicted RBP6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 ANKRD42Q8N9B4 389 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TEX19Q8NA77 164 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 CFHR4Q92496 578 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TTC17Q96AE7 1141 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 CLIP3Q96DZ5 547 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 CEP95Q96GE4 821 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 SMURF1Q9HCE7 757 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 MTMR4Q9NYA4 1195 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 AGTPBP1Q9UPW5 1226 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 ANKRD6Q9Y2G4 727 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 SCINQ9Y6U3 715 aa6.34□□□□□ -1.39
THUMPD3-207ENST00000461636 TRIM75PA6NK02 468 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 NARSO43776 548 aaKnown RBP6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 PF4V1P10720 104 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 EEF2P13639 858 aaKnown RBP6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 ID4P47928 161 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 HMGCS2P54868 508 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 HAND2P61296 217 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 CD83Q01151 205 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 ICA1Q05084 483 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 GRM1Q13255 1194 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 CRHR2Q13324 411 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 TRIM29Q14134 588 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 GBX1Q14549 363 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 COBLL1Q53SF7 1204 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 IQSEC1Q6DN90 963 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 GRAMD4Q6IC98 578 aa6.33□□□□□ -1.4
THUMPD3-207ENST00000461636 CCDC70Q6NSX1 233 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms