RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 RFX8Q6ZV50 586 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 GDF7Q7Z4P5 450 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 CLNKQ7Z7G1 428 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 PSD4Q8NDX1 1056 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 CPT1CQ8TCG5 803 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SNX27Q96L92 541 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SLC46A1Q96NT5 459 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 MYLK2Q9H1R3 596 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 EIF2B4Q9UI10 523 aaKnown RBP4.51□□□□□ -1.69
CLK1-206ENST00000461326 SLC39A10Q9ULF5 831 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SORCS3Q9UPU3 1222 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 MAN2B2Q9Y2E5 1009 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 CHST2Q9Y4C5 530 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 RAD54BQ9Y620 910 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 A0A1W2PS29 197 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 GRXCR1A8MXD5 290 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 PROB1E7EW31 1015 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 PODXLO00592 558 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 NPHP1O15259 732 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 KCNQ3O43525 872 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 PRSS23O95084 383 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 GPANK1O95872 356 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 TPH1P17752 444 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 LAG3P18627 525 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 APOBEC3AP31941 199 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 CHKAP35790 457 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 GCLCP48506 637 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 PXNP49023 591 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 PPM1FP49593 454 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 ANXA11P50995 505 aaKnown RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 KRT17Q04695 432 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 HLXQ14774 488 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 PLA1AQ53H76 456 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 TSHZ3Q63HK5 1081 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 SKAP1Q86WV1 359 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 MUL1Q969V5 352 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 MARS2Q96GW9 593 aaKnown RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 RMDN3Q96TC7 470 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 NELL2Q99435 816 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 SLC46A2Q9BY10 475 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 CA14Q9ULX7 337 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 USP15Q9Y4E8 981 aaPredicted RBP4.5□□□□□ -1.69
CLK1-206ENST00000461326 FPGT-TNNI3KV9GXZ4 949 aa4.5□□□□□ -1.69
CLK1-206ENST00000461326 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 FAM234BA2RU67 622 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 TMEM233B4DJY2 109 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 LEFTY2O00292 366 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 TOR1BO14657 336 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 ERN1O75460 977 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 GLP2RO95838 553 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CFIP05156 583 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 HSD3B1P14060 373 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 EGR1P18146 543 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 BTF3P20290 206 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 FGFR4P22455 802 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 GABRB3P28472 473 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 PDIA3P30101 505 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 SLC5A2P31639 672 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 AVPR1BP47901 424 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CLK3P49761 638 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 POLE2P56282 527 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 RPS7P62081 194 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 OCA2Q04671 838 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 POU5F1BQ06416 359 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 BIRC3Q13489 604 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 ELF2Q15723 593 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 ERCC6LQ2NKX8 1250 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 SPDYE7PQ495Y7 208 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 PREPLQ4J6C6 727 aaPredicted RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 MRNIPQ6NTE8 343 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 Q6YL49 198 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 MICALCLQ6ZW33 695 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 TMPRSS9Q7Z410 1059 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 ZNF354CQ86Y25 554 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 GATAD2AQ86YP4 633 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 MAPKAPK5Q8IW41 473 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CACNA2D3Q8IZS8 1091 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 TRAPPC12Q8WVT3 735 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 RAPGEF4Q8WZA2 1011 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 LRRC46Q96FV0 321 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 OSBPL9Q96SU4 736 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 NEU1Q99519 415 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 GDF15Q99988 308 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 PTDSS2Q9BVG9 487 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 TTYH3Q9C0H2 523 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 R3HDMLQ9H3Y0 253 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 RGL1Q9NZL6 768 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 LUZP4Q9P127 313 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CTTNBP2NLQ9P2B4 639 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 MTO1Q9Y2Z2 717 aaKnown RBP4.49□□□□□ -1.69
CLK1-206ENST00000461326 INSL6Q9Y581 213 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CDY1Q9Y6F8 540 aa4.49□□□□□ -1.69
CLK1-206ENST00000461326 CCDC189A1A4V9 331 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 MYADML2A6NDP7 307 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 RAB27BO00194 218 aa4.48□□□□□ -1.69
CLK1-206ENST00000461326 RNASET2O00584 256 aaKnown RBP4.48□□□□□ -1.69
CLK1-206ENST00000461326 DCLK1O15075 740 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms