RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
NCK1-202ENST00000460960 GTPBP4Q9BZE4 634 aaKnown RBP15.72■□□□□ 0.11
NCK1-202ENST00000460960 GKN1Q9NS71 199 aa15.72■□□□□ 0.11
NCK1-202ENST00000460960 OBP2AQ9NY56 170 aa15.72■□□□□ 0.11
NCK1-202ENST00000460960 ATG13O75143 517 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 ITGB3P05106 788 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TYMPP19971 482 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 CYP3A5P20815 502 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 CDC25CP30307 473 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 POLR2BP30876 1174 aaKnown RBP15.71■□□□□ 0.11
NCK1-202ENST00000460960 MPLP40238 635 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 AARSP49588 968 aaKnown RBP eCLIP15.71■□□□□ 0.11
NCK1-202ENST00000460960 LRRC63Q05C16 580 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 RNF43Q68DV7 783 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TRIM68Q6AZZ1 485 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TCEAL6Q6IPX3 200 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 PSAPL1Q6NUJ1 521 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 MLKLQ8NB16 471 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TCEAL3Q969E4 200 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 SENP8Q96LD8 212 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 HHIPQ96QV1 700 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 TSG101Q99816 390 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 EBF3Q9H4W6 596 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 POLR3BQ9NW08 1133 aaPredicted RBP15.71■□□□□ 0.11
NCK1-202ENST00000460960 FRMD4BQ9Y2L6 1034 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 CFAP47Q6ZTR5 3102 aa15.71■□□□□ 0.11
NCK1-202ENST00000460960 PIRO00625 290 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 CETN3O15182 167 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 RNF40O75150 1001 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 KCNK5O95279 499 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 TNNI1P19237 187 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 RPL13P26373 211 aaKnown RBP15.7■□□□□ 0.1
NCK1-202ENST00000460960 RAP1GAPP47736 663 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 TUFMP49411 452 aaKnown RBP15.7■□□□□ 0.1
NCK1-202ENST00000460960 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
NCK1-202ENST00000460960 PPP3CAQ08209 521 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 BFSP1Q12934 665 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 TDRD10Q5VZ19 366 aaKnown RBP15.7■□□□□ 0.1
NCK1-202ENST00000460960 FSTL4Q6MZW2 842 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 IRF2BP1Q8IU81 584 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 OR10T2Q8NGX3 314 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 RWDD2AQ9UIY3 292 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 AGAP1Q9UPQ3 857 aa15.7■□□□□ 0.1
NCK1-202ENST00000460960 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.7■□□□□ 0.1
NCK1-202ENST00000460960 EML5Q05BV3 1969 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 ZFHX4Q86UP3 3567 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 VNN1O95497 513 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CST3P01034 146 aaPredicted RBP15.69■□□□□ 0.1
NCK1-202ENST00000460960 EGFP01133 1207 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 TMEM191BP0C7N4 346 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 PSMC2P35998 433 aaKnown RBP15.69■□□□□ 0.1
NCK1-202ENST00000460960 AVPR1AP37288 418 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 PPP1R2P41236 205 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 VAMP7P51809 220 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 LILRA4P59901 499 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CLDN10P78369 228 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 SHC2P98077 582 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CREB5Q02930 508 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 TYRO3Q06418 890 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 RUNX3Q13761 415 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CC2D1AQ6P1N0 951 aaPredicted RBP15.69■□□□□ 0.1
NCK1-202ENST00000460960 TRAPPC11Q7Z392 1133 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 METTL23Q86XA0 190 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CSGALNACT2Q8N6G5 542 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 MAB21L3Q8N8X9 362 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 FNBP1Q96RU3 617 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 TSPAN18Q96SJ8 248 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 FUCA2Q9BTY2 467 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 EDEM2Q9BV94 578 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 SRRTQ9BXP5 876 aaKnown RBP15.69■□□□□ 0.1
NCK1-202ENST00000460960 SLC46A2Q9BY10 475 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 VPS45Q9NRW7 570 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 ABI2Q9NYB9 513 aaPredicted RBP15.69■□□□□ 0.1
NCK1-202ENST00000460960 PCDHGA5Q9Y5G8 931 aa15.69■□□□□ 0.1
NCK1-202ENST00000460960 CHD6Q8TD26 2715 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 BICDL2A1A5D9 508 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 SYCE3A1L190 88 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 TM4SF5O14894 197 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 MAPK13O15264 365 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 C4BPAP04003 597 aaKnown RBP15.68■□□□□ 0.1
NCK1-202ENST00000460960 KRT19P08727 400 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 EPB41P11171 864 aaKnown RBP15.68■□□□□ 0.1
NCK1-202ENST00000460960 ARSAP15289 507 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 ATF6P18850 670 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 NOVA1P51513 510 aaKnown RBP15.68■□□□□ 0.1
NCK1-202ENST00000460960 SURF1Q15526 300 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 ELF2Q15723 593 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 DUOXA2Q1HG44 320 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 HSP90AA4PQ58FG1 418 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 CMTM8Q8IZV2 173 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 LSM14BQ9BX40 385 aaKnown RBP15.68■□□□□ 0.1
NCK1-202ENST00000460960 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 IL21Q9HBE4 155 aa15.68■□□□□ 0.1
NCK1-202ENST00000460960 HPS4Q9NQG7 708 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms