RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PDGFCQ9NRA1 345 aa3.35□□□□□ -1.87
SYPL1-203ENST00000460770 AMFRQ9UKV5 643 aa3.35□□□□□ -1.87
SYPL1-203ENST00000460770 SCAF8Q9UPN6 1271 aaKnown RBP3.35□□□□□ -1.87
SYPL1-203ENST00000460770 AFG3L2Q9Y4W6 797 aa3.35□□□□□ -1.87
SYPL1-203ENST00000460770 PAXBP1Q9Y5B6 917 aa3.35□□□□□ -1.87
SYPL1-203ENST00000460770 ERC2O15083 957 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 A1BGP04217 495 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 POU2F2P09086 479 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 SFPQP23246 707 aaKnown RBP eCLIP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 ATP5F1P24539 256 aaPredicted RBP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 FAM50AQ14320 339 aaKnown RBP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 PLS1Q14651 629 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 ODF1Q14990 250 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 LRRC41Q15345 812 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 FAM187BQ17R55 369 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 DEPDC1Q5TB30 811 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 IZUMO1Q8IYV9 350 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 CCDC17Q96LX7 622 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 NUP88Q99567 741 aaPredicted RBP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 MACROD1Q9BQ69 325 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 THAP7Q9BT49 309 aaPredicted RBP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 PIH1D1Q9NWS0 290 aaKnown RBP3.34□□□□□ -1.87
SYPL1-203ENST00000460770 XPR1Q9UBH6 696 aa3.34□□□□□ -1.87
SYPL1-203ENST00000460770 KAT6AQ92794 2004 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 M0R3H8 397 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 MARCH6O60337 910 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 ZRANB2O95218 330 aaKnown RBP eCLIP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 CCKARP32238 428 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 RENBPP51606 427 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 PRKAG1P54619 331 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 NKX6-1P78426 367 aaPredicted RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 MYO1EQ12965 1108 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 Q4G0T1 1027 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 MEX3CQ5U5Q3 659 aaKnown RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 RUSC1-AS1Q66K80 236 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 LMBRD2Q68DH5 695 aaPredicted RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 CAND1Q86VP6 1230 aaKnown RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 PRPF38AQ8NAV1 312 aaKnown RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 NGDNQ8NEJ9 315 aaKnown RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 COQ8BQ96D53 544 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 MVB12AQ96EY5 273 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 SMAD5Q99717 465 aaKnown RBP3.33□□□□□ -1.88
SYPL1-203ENST00000460770 SNX15Q9NRS6 342 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 POT1Q9NUX5 634 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 KLHL13Q9P2N7 655 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 STXBP5LQ9Y2K9 1186 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 MED16Q9Y2X0 877 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 TNKSO95271 1327 aa3.33□□□□□ -1.88
SYPL1-203ENST00000460770 PDE8BO95263 885 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 HDCP19113 662 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 PRKAR1BP31321 381 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 MTHFSP49914 203 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 CDKN1CP49918 316 aaPredicted RBP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 HTRA4P83105 476 aaPredicted RBP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 E2F1Q01094 437 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 SP2Q02086 613 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 MIDNQ504T8 468 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 CERCAMQ5T4B2 595 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 C16orf71Q8IYS4 520 aaPredicted RBP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 SPARTQ8N0X7 666 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 ABRAQ8N0Z2 381 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 WASF1Q92558 559 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 C1GALT1C1Q96EU7 318 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 CAMKK2Q96RR4 588 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 PCDHA6Q9UN73 950 aa3.32□□□□□ -1.88
SYPL1-203ENST00000460770 LUC7L2Q9Y383 392 aaKnown RBP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.32□□□□□ -1.88
SYPL1-203ENST00000460770 WASHC2CQ9Y4E1 1318 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 AP4M1O00189 453 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 FCHO1O14526 889 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 ALDH5A1P51649 535 aaPredicted RBP3.31□□□□□ -1.88
SYPL1-203ENST00000460770 DGKEP52429 567 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 UCP3P55916 312 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 CCNIQ14094 377 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 FGL2Q14314 439 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 MLC1Q15049 377 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 RBMS2Q15434 407 aaKnown RBP3.31□□□□□ -1.88
SYPL1-203ENST00000460770 C10orf25Q5T742 122 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 KIAA1161Q6NSJ0 714 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 TMEM65Q6PI78 240 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 LVRNQ6Q4G3 990 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 VSTM1Q6UX27 236 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 ZNF783Q6ZMS7 281 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 ZBTB46Q86UZ6 589 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 GAS2L3Q86XJ1 694 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 OSR1Q8TAX0 266 aaPredicted RBP3.31□□□□□ -1.88
SYPL1-203ENST00000460770 ZCRB1Q8TBF4 217 aaKnown RBP3.31□□□□□ -1.88
SYPL1-203ENST00000460770 CHMP4CQ96CF2 233 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 MARK4Q96L34 752 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 LENG8Q96PV6 779 aaPredicted RBP3.31□□□□□ -1.88
SYPL1-203ENST00000460770 MMS19Q96T76 1030 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 EFHD1Q9BUP0 239 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 VPS33BQ9H267 617 aa3.31□□□□□ -1.88
SYPL1-203ENST00000460770 CXorf36Q9H7Y0 433 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms