RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 NELL2Q99435 816 aa4.52□□□□□ -1.69
SSX2IP-204ENST00000459708 APOL5Q9BWW9 433 aa4.52□□□□□ -1.69
SSX2IP-204ENST00000459708 LRRC27Q9C0I9 530 aa4.52□□□□□ -1.69
SSX2IP-204ENST00000459708 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
SSX2IP-204ENST00000459708 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
SSX2IP-204ENST00000459708 FYCO1Q9BQS8 1478 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 MRC2Q9UBG0 1479 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 LRRC3CA6NJW4 275 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 SLC16A3O15427 465 aaKnown RBP4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 MARCH6O60337 910 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 MGEA5O60502 916 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 NXPH3O95157 252 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 VNN1O95497 513 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 TTLL1O95922 423 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 FESP07332 822 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 CYP2C9P11712 490 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 MYF5P13349 255 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 IL1R1P14778 569 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 KCNA3P22001 575 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 FBLP22087 321 aaKnown RBP4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 KLRC1P26715 233 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 ITPKBP27987 946 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 LRPAP1P30533 357 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 CCDC142Q17RM4 750 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 SLC44A4Q53GD3 710 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 ZDHHC24Q6UX98 284 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 DTX2Q86UW9 622 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 RASAL3Q86YV0 1011 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 TMEM171Q8WVE6 324 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 GLG1Q92896 1179 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 SARAFQ96BY9 339 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 NMD3Q96D46 503 aaKnown RBP4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 R3HDM4Q96D70 268 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 COL20A1Q9P218 1284 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 ADAM21Q9UKJ8 722 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 OGDHLQ9ULD0 1010 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 SNX14Q9Y5W7 946 aa4.51□□□□□ -1.69
SSX2IP-204ENST00000459708 MBD3L4A6NDZ8 208 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 MBD3L3A6NE82 208 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 PYCARD-AS1I3L0S3 204 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 TLR5O60602 858 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 MAP4K4O95819 1239 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 IGLV2-14P01704 120 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 XRCC6P12956 609 aaKnown RBP eCLIP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 ZKSCAN1P17029 563 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 CCT8P50990 548 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 PDE6CP51160 858 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 DGKEP52429 567 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 PROK1P58294 105 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 FMO1Q01740 532 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 SATB1Q01826 763 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 BMPR2Q13873 1038 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 E2F2Q14209 437 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 AKNAD1Q5T1N1 836 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 ZNF551Q7Z340 670 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 SLC15A3Q8IY34 581 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 NTN5Q8WTR8 489 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 SPSB4Q96A44 273 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 HAPLN3Q96S86 360 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 STK31Q9BXU1 1019 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 ZNF287Q9HBT7 754 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 GLOD4Q9HC38 313 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 A1CFQ9NQ94 594 aaKnown RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 ARHGEF3Q9NR81 526 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 ARPP21Q9UBL0 812 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 PAXBP1Q9Y5B6 917 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 CTTNBP2Q8WZ74 1663 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 CARMIL1Q5VZK9 1371 aa4.5□□□□□ -1.69
SSX2IP-204ENST00000459708 CUX2O14529 1486 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 CCDC18Q5T9S5 1454 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 MAGI1Q96QZ7 1491 aaPredicted RBP4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 COL11A2P13942 1736 aaPredicted RBP4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 A1L4Q6 167 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 F8W8V4 182 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 H0YIZ8 118 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 H7C4K7 107 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 GPD1P21695 349 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 PRKAG1P54619 331 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 MRPS21P82921 87 aaKnown RBP4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 PTCHD3Q3KNS1 767 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 DPY19L3Q6ZPD9 716 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 KCTD20Q7Z5Y7 419 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 OSCP1Q8WVF1 389 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 ZNF764Q96H86 408 aaPredicted RBP4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 C8orf48Q96LL4 319 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 TIMP4Q99727 224 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 CDY1Q9Y6F8 540 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
SSX2IP-204ENST00000459708 TARBP1Q13395 1621 aaKnown RBP4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 LOC102723971A0A1B0GUV8 181 aa4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 GCOM1H8Y6P7 765 aaPredicted RBP4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 RRP9O43818 475 aaKnown RBP4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 SRGAP2O75044 1071 aa4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 RASSF9O75901 435 aa4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 WT1P19544 449 aaPredicted RBP4.48□□□□□ -1.69
SSX2IP-204ENST00000459708 LY6KQ17RY6 165 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms