RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 ARRDC1-AS1Q9H2J1 176 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 RBM12Q9NTZ6 932 aaKnown RBP6.13□□□□□ -1.43
VPS8-214ENST00000458721 GTSE1Q9NYZ3 720 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 ANKFY1Q9P2R3 1169 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 UXTQ9UBK9 157 aaPredicted RBP6.13□□□□□ -1.43
VPS8-214ENST00000458721 TUBGCP4Q9UGJ1 667 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 SLC8A2Q9UPR5 921 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 C2CD2Q9Y426 696 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 ASPMQ8IZT6 3477 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 CACNA1GO43497 2377 aa6.13□□□□□ -1.43
VPS8-214ENST00000458721 HNRNPDLO14979 420 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 KHNYNO15037 678 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 FAM189A1O60320 539 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 LARGE1O95461 756 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 PRAMEF12O95522 483 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 APBB3O95704 486 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 CXCL8P10145 99 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 EPXP11678 715 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 CEACAM1P13688 526 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 TCF3P15923 654 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 GJA1P17302 382 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 CD33P20138 364 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 CSRP1P21291 193 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 AMPD1P23109 780 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 HOXD12P35452 270 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SOX9P48436 509 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 PDE6CP51160 858 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 LILRA4P59901 499 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 BFSP1Q12934 665 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 DUSP4Q13115 394 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 RUNX3Q13761 415 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 GNL2Q13823 731 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 SPEGQ15772 3267 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 PLK5Q496M5 336 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 STXBP5Q5T5C0 1151 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 GPR158Q5T848 1215 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SAMD5Q5TGI4 173 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SPATA1Q5VX52 437 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 RNF43Q68DV7 783 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 HEATR6Q6AI08 1181 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 RINT1Q6NUQ1 792 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 C1orf186Q6ZWK4 172 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 DNAJB7Q7Z6W7 309 aaPredicted RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 KBTBD6Q86V97 674 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SKAP1Q86WV1 359 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 NT5DC4Q86YG4 428 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SLC9A9Q8IVB4 645 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 CPA6Q8N4T0 437 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 FBXO18Q8NFZ0 1043 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 TPCN2Q8NHX9 752 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 SPATA18Q8TC71 538 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 LEO1Q8WVC0 666 aaPredicted RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 ATP2A3Q93084 1043 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 TRMT2BQ96GJ1 504 aaKnown RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 CEP295NLQ96MC4 621 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 EDEM2Q9BV94 578 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 ASB7Q9H672 318 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 TMEM206Q9H813 350 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 ABCB6Q9NP58 842 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 RXFP3Q9NSD7 469 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 ZNF232Q9UNY5 417 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 USP20Q9Y2K6 914 aa6.12□□□□□ -1.43
VPS8-214ENST00000458721 GPC6Q9Y625 555 aaPredicted RBP6.12□□□□□ -1.43
VPS8-214ENST00000458721 SCN1AP35498 2009 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 PTPRDP23468 1912 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 ANAPC1Q9H1A4 1944 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 ITPR1Q14643 2758 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 A0A087WWV3 80 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 LNP1A1A4G5 178 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 ANO9A1A5B4 782 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 BCLAF3A2AJT9 711 aaKnown RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 PIK3R2O00459 728 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 OGTO15294 1046 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 SLC16A4O15374 487 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 MEFVO15553 781 aaPredicted RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 EXTL3O43909 919 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 JAK2O60674 1132 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 CSH1P0DML2 217 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 CSH2P0DML3 217 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 PFKLP17858 780 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 ATF6P18850 670 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 U2AF2P26368 475 aaKnown RBP eCLIP6.11□□□□□ -1.439e-12■■■■□ 26.2
VPS8-214ENST00000458721 CDC25AP30304 524 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 NOS2P35228 1153 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 TXLNAP40222 546 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 PNPLA4P41247 253 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 LIG4P49917 911 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 NOVA1P51513 510 aaKnown RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 CLDN10P78369 228 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 SRSF5Q13243 272 aaKnown RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 SF3A2Q15428 464 aaKnown RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 TAF12Q16514 161 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 ECM1Q16610 540 aa6.11□□□□□ -1.43
VPS8-214ENST00000458721 NFE2Q16621 373 aaPredicted RBP6.11□□□□□ -1.43
VPS8-214ENST00000458721 HSF5Q4G112 596 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms