RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 KRT38O76015 456 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 GJC1P36383 396 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 MAP2K2P36507 400 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 ADCY8P40145 1251 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 TNFAIP8L3Q5GJ75 292 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 BICD1Q96G01 975 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 MFSD14AQ96MC6 490 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
SYNE2-207ENST00000458046 MROH7Q68CQ1 1323 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
SYNE2-207ENST00000458046 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 TCP11X1B4DZS4 312 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ABLIM3O94929 683 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 CFHP08603 1231 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ITIH2P19823 946 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 MPSTP25325 297 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ACAP1Q15027 740 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 SNCBQ16143 134 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 CCDC91Q7Z6B0 441 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 PASD1Q8IV76 773 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 GDAP1Q8TB36 358 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 IQCGQ9H095 443 aaKnown RBP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 WHRNQ9P202 907 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 GHRP10912 638 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 UNGP13051 313 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 IVDP26440 423 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 KCNC4Q03721 635 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 XRCC4Q13426 336 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 NR6A1Q15406 480 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 WDR44Q5JSH3 913 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 SEPT14Q6ZU15 432 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 USP6NLQ92738 828 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 SNF8Q96H20 258 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ROPN1BQ9BZX4 212 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ROPN1Q9HAT0 212 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 VPS45Q9NRW7 570 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 HOMER3Q9NSC5 361 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYNE2-207ENST00000458046 ANAPC5Q9UJX4 755 aa12.36□□□□□ -0.43
SYNE2-207ENST00000458046 THAP12O43422 761 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ZNF862O60290 1169 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 RALAP11233 206 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 XPAP23025 273 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TCEA2Q15560 299 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ZNF568Q3ZCX4 644 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 RHBDF2Q6PJF5 856 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TRPM8Q7Z2W7 1104 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 RNF135Q8IUD6 432 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TIPINQ9BVW5 301 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 SQORQ9Y6N5 450 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-207ENST00000458046 FOXD2O60548 495 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TTC4O95801 387 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 GH1P01241 217 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ATF2P15336 505 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 JAK3P52333 1124 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 MOGSQ13724 837 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 MPP2Q14168 576 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ITIH4Q14624 930 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 KIAA0319Q5VV43 1072 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 GPD1LQ8N335 351 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 P3H4Q92791 437 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 TCHPQ9BT92 498 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 YIPF2Q9BWQ6 316 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 DCLK3Q9C098 648 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
SYNE2-207ENST00000458046 RASSF1Q9NS23 344 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms