RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 UNC93AQ86WB7 457 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 MAML2Q8IZL2 1156 aaPredicted RBP19.01■□□□□ 0.63
MSH6-207ENST00000456246 CCDC150Q8NCX0 1101 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 ZFYVE19Q96K21 471 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 SLITRK1Q96PX8 696 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 FAM83CQ9BQN1 747 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 DNAI2Q9GZS0 605 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 LMAN1LQ9HAT1 526 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 TRPC7Q9HCX4 862 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 GKN1Q9NS71 199 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 GTSE1Q9NYZ3 720 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 CCL26Q9Y258 94 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 USP34Q70CQ2 3546 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 CETN3O15182 167 aa19■□□□□ 0.63
MSH6-207ENST00000456246 STX10O60499 249 aa19■□□□□ 0.63
MSH6-207ENST00000456246 RTN3O95197 1032 aaPredicted RBP19■□□□□ 0.63
MSH6-207ENST00000456246 HLA-DRAP01903 254 aa19■□□□□ 0.63
MSH6-207ENST00000456246 CHRNB1P11230 501 aa19■□□□□ 0.63
MSH6-207ENST00000456246 CCR3P51677 355 aa19■□□□□ 0.63
MSH6-207ENST00000456246 USP4Q13107 963 aa19■□□□□ 0.63
MSH6-207ENST00000456246 MTF1Q14872 753 aa19■□□□□ 0.63
MSH6-207ENST00000456246 C1orf220Q5T0J3 134 aa19■□□□□ 0.63
MSH6-207ENST00000456246 ZNF658Q5TYW1 1059 aaPredicted RBP19■□□□□ 0.63
MSH6-207ENST00000456246 SYNPOQ8N3V7 929 aa19■□□□□ 0.63
MSH6-207ENST00000456246 KIAA1958Q8N8K9 716 aa19■□□□□ 0.63
MSH6-207ENST00000456246 PDZD8Q8NEN9 1154 aa19■□□□□ 0.63
MSH6-207ENST00000456246 ENGASEQ8NFI3 743 aa19■□□□□ 0.63
MSH6-207ENST00000456246 EXOC4Q96A65 974 aa19■□□□□ 0.63
MSH6-207ENST00000456246 SMARCD1Q96GM5 515 aa19■□□□□ 0.63
MSH6-207ENST00000456246 FAXDC2Q96IV6 333 aa19■□□□□ 0.63
MSH6-207ENST00000456246 TSG101Q99816 390 aa19■□□□□ 0.63
MSH6-207ENST00000456246 B3GNT5Q9BYG0 378 aa19■□□□□ 0.63
MSH6-207ENST00000456246 ZNF518BQ9C0D4 1074 aa19■□□□□ 0.63
MSH6-207ENST00000456246 GCNT4Q9P109 453 aa19■□□□□ 0.63
MSH6-207ENST00000456246 ARHGAP26Q9UNA1 814 aa19■□□□□ 0.63
MSH6-207ENST00000456246 PCDHGA2Q9Y5H1 932 aa19■□□□□ 0.63
MSH6-207ENST00000456246 VPS13AQ96RL7 3174 aa19■□□□□ 0.63
MSH6-207ENST00000456246 ANAPC1Q9H1A4 1944 aa19■□□□□ 0.63
MSH6-207ENST00000456246 MYO15AQ9UKN7 3530 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 KINO60870 393 aaKnown RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 LMNAP02545 664 aaKnown RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 EPB41P11171 864 aaKnown RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 HDCP19113 662 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 CDH8P55286 799 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 MCCD1P59942 119 aaPredicted RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 CSTF1Q05048 431 aaKnown RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 MTAPQ13126 283 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 RUNX3Q13761 415 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 FAM35AQ86V20 835 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 ELOA2Q8IYF1 753 aaPredicted RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 NUP93Q8N1F7 819 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 SPATA20Q8TB22 786 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 OVCA2Q8WZ82 227 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 SMARCE1Q969G3 411 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 CYP3A43Q9HB55 503 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 TMEM8AQ9HCN3 771 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 DMAP1Q9NPF5 467 aaPredicted RBP18.99■□□□□ 0.63
MSH6-207ENST00000456246 R4GN57 208 aa18.99■□□□□ 0.63
MSH6-207ENST00000456246 PPP1R2P41236 205 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 ASPAP45381 313 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 RAP1GAPP47736 663 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 SOX9P48436 509 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 GCLMP48507 274 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 NRLP54845 237 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 TNK2Q07912 1038 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 ZNF77Q15935 545 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 KRT39Q6A163 491 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 CRYBG2Q8N1P7 616 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 CPA6Q8N4T0 437 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 MED10Q9BTT4 135 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 SDCBP2Q9H190 292 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 COMMD8Q9NX08 183 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 ZSCAN32Q9NX65 697 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 CIZ1Q9ULV3 898 aaPredicted RBP18.98■□□□□ 0.63
MSH6-207ENST00000456246 GVINP1Q7Z2Y8 2422 aa18.98■□□□□ 0.63
MSH6-207ENST00000456246 C2orf78A6NCI8 922 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 ZNF840PA6NDX5 716 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 CLDN5O00501 218 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 SLC16A3O15427 465 aaKnown RBP18.97■□□□□ 0.63
MSH6-207ENST00000456246 TRIM49P0CI25 452 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 TRIM49CP0CI26 452 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 YWHAQP27348 245 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 IFNAR2P48551 515 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 NDST1P52848 882 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 USP46P62068 366 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 LRRC63Q05C16 580 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 PPP3CAQ08209 521 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 INCA1Q0VD86 236 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 STIM1Q13586 685 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 TXNDC11Q6PKC3 985 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 SMYD4Q8IYR2 804 aaPredicted RBP18.97■□□□□ 0.63
MSH6-207ENST00000456246 TTC39CQ8N584 583 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 ARL14EPQ8N8R7 260 aaPredicted RBP18.97■□□□□ 0.63
MSH6-207ENST00000456246 OSCP1Q8WVF1 389 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 NELL1Q92832 810 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 ATP2A3Q93084 1043 aa18.97■□□□□ 0.63
MSH6-207ENST00000456246 NIF3L1Q9GZT8 377 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms