RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 METTL23Q86XA0 190 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC103Q8IW40 242 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ANKRD35Q8N283 1001 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 POU5F2Q8N7G0 328 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 DAGLBQ8NCG7 672 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RCBTB1Q8NDN9 531 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 DPF2Q92785 391 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SYTL4Q96C24 671 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC114Q96M63 670 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF830Q96NB3 372 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ATP6V0BQ99437 205 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 REEP2Q9BRK0 252 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TCHPQ9BT92 498 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 MAK16Q9BXY0 300 aaKnown RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRDM14Q9GZV8 571 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADAMTS10Q9H324 1103 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM8AQ9HCN3 771 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SLC35C2Q9NQQ7 365 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SNTG1Q9NSN8 517 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GFOD1Q9NXC2 390 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 STK32BQ9NY57 414 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ACTR3BQ9P1U1 418 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CACNG4Q9UBN1 327 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZMAT5Q9UDW3 170 aaKnown RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 KLHL20Q9Y2M5 609 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCDHA2Q9Y5H9 948 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 LYVE1Q9Y5Y7 322 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 EIF4G1Q04637 1599 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 LINC00854A0A1B0GVQ3 168 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 K7EPI3 171 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SGK1O00141 431 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARNTLO00327 626 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PROM1O43490 865 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 KINO60870 393 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMPD2O60906 423 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CLASP2O75122 1294 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 METTL18O95568 372 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HPXP02790 462 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CLEC3BP05452 202 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRKCBP05771 671 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CD3EP07766 207 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 DLDP09622 509 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 GZMAP12544 262 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PLS3P13797 630 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 EN2P19622 333 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PSMA4P25789 261 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HOXD10P28358 340 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HOXA11P31270 313 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 STIP1P31948 543 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TCF7P36402 384 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 GP5P40197 560 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 MTHFRP42898 656 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 C21orf58P58505 322 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 YBEYP58557 167 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ERVFC1P60507 584 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 RPS3AP61247 264 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HERVK_113P62684 666 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 MALLQ13021 153 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM132BQ14DG7 1078 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SEC23BQ15437 767 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 NR0B2Q15466 257 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 GPR19Q15760 415 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 BAK1Q16611 211 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HSP90AA5PQ58FG0 334 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 DCAF17Q5H9S7 520 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM69AQ5T7M9 428 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 FSTL4Q6MZW2 842 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HHIPL2Q6UWX4 724 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNF111Q6ZNA4 994 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 HEATR3Q7Z4Q2 680 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 WDR63Q8IWG1 891 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF655Q8N720 491 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 POMGNT2Q8NAT1 580 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 GLIS1Q8NBF1 620 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 C3orf20Q8ND61 904 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 DENND6BQ8NEG7 585 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PDZD8Q8NEN9 1154 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 OR6Y1Q8NGX8 325 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ABHD4Q8TB40 342 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TSPEARQ8WU66 669 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SDCCAG3Q96C92 435 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 BORCS6Q96GS4 357 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TCTN2Q96GX1 697 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM167AQ96KS9 214 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TRAPPC9Q96Q05 1148 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SPXQ9BT56 116 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 APOL6Q9BWW8 343 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 FUT8Q9BYC5 575 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 MAGEB5Q9BZ81 275 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 FOXP3Q9BZS1 431 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRT23Q9C075 422 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PABPC3Q9H361 631 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SEMA4AQ9H3S1 761 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 ABHD16BQ9H3Z7 469 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 NCOR1P1Q9H4R4 102 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 SARS2Q9NP81 518 aaKnown RBP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 MID1IP1Q9NPA3 183 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PNPOQ9NVS9 261 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms