RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 GRIK1P39086 918 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 RUNX3Q13761 415 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 AASDHQ4L235 1098 aaPredicted RBP17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 MDH1BQ5I0G3 518 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 N4BP2L1Q5TBK1 243 aaPredicted RBP17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 C1orf228Q6PIY5 440 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 CEP68Q76N32 757 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 SPEM1Q8N4L4 309 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 OR6B3Q8NGW1 331 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 MYCBPAPQ8TBZ2 947 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 PARD3BQ8TEW8 1205 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 PCED1BQ96HM7 432 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 SPATA17Q96L03 361 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 SNX25Q9H3E2 840 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 TRPC7Q9HCX4 862 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 USP24Q9UPU5 2620 aa17.54■□□□□ 0.4
RPUSD3-209ENST00000451405 PTPRDP23468 1912 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 LRRIQ3A6PVS8 624 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 CHURC1-FNTBB4DL54 471 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 HRO43593 1189 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 FAM163BP0C2L3 166 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 PTPN1P18031 435 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 FNTBP49356 437 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 CACNA2D1P54289 1103 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 CDH8P55286 799 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 DLG4P78352 724 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 PSMD2Q13200 908 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 TRPC3Q13507 836 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 CCINQ13939 588 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 LRRC32Q14392 662 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 ZNF268Q14587 947 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 DGKKQ5KSL6 1271 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 TDRD10Q5VZ19 366 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 VSTM1Q6UX27 236 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 SPATA32Q96LK8 384 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 KCTD10Q9H3F6 313 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 FBRSL1Q9HCM7 1045 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 EXOC1Q9NV70 894 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 TMEM30AQ9NV96 361 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 GCNT4Q9P109 453 aa17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 NXF1Q9UBU9 619 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-209ENST00000451405 K7ESF4 209 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 VNN1O95497 513 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 STAU1O95793 577 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 C4BPAP04003 597 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 PRR29P0C7W0 189 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 NDUFA8P51970 172 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 TNNC1P63316 161 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 CLDN10P78369 228 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 COL9A2Q14055 689 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 HEATR6Q6AI08 1181 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 PKN3Q6P5Z2 889 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 C12orf50Q8NA57 414 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 TTC16Q8NEE8 873 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 B3GNT5Q9BYG0 378 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 KIF9Q9HAQ2 790 aa17.52■□□□□ 0.4
RPUSD3-209ENST00000451405 FAM237AA0A1B0GTK4 181 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 F8VP50 259 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 CLDN5O00501 218 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 PHACTR2O75167 634 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 USP17L7P0C7H9 530 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 ATICP31939 592 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 GALK1P51570 392 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 ZXDBP98169 803 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 FAM160A1Q05DH4 1040 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 SRSF5Q13243 272 aaKnown RBP17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 ZNF77Q15935 545 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 NAIF1Q69YI7 327 aaPredicted RBP17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 FSTL4Q6MZW2 842 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 DENND5BQ6ZUT9 1274 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 SLC9A9Q8IVB4 645 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 SDCBP2Q9H190 292 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 LINC00597Q9H2U6 94 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 SMYD3Q9H7B4 428 aa17.51■□□□□ 0.39
RPUSD3-209ENST00000451405 TRAV19A0A0A6YYK7 116 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 A8MXQ7 604 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 PDXKO00764 312 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 RPN1P04843 607 aaKnown RBP17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 CKMP06732 381 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 HDCP19113 662 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 PMLP29590 882 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 RAP1GAPP47736 663 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 KRT85P78386 507 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 BIRC3Q13489 604 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 MTF1Q14872 753 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 TMEM196Q5HYL7 178 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 SH3RF2Q8TEC5 729 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 C8orf48Q96LL4 319 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 TTLL2Q9BWV7 592 aa17.5■□□□□ 0.39
RPUSD3-209ENST00000451405 ZNF518BQ9C0D4 1074 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms