RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 KNOP1Q1ED39 458 aaKnown RBP28.95■■■□□ 2.22
USP42-204ENST00000451154 BMT2Q1RMZ1 405 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 DENND5BQ6ZUT9 1274 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 CEP68Q76N32 757 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 CPA6Q8N4T0 437 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 P2RY13Q9BPV8 354 aa28.95■■■□□ 2.22
USP42-204ENST00000451154 RNF40O75150 1001 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 PTPN1P18031 435 aaKnown RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 SDHBP21912 280 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 ANXA13P27216 316 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 CASP4P49662 377 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 TNNC1P63316 161 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 DNM1Q05193 864 aaKnown RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 USP4Q13107 963 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 TRPC3Q13507 836 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 DPEP3Q9H4B8 488 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 TRPM5Q9NZQ8 1165 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 NXF1Q9UBU9 619 aaKnown RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 SERTAD1Q9UHV2 236 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 CDV3Q9UKY7 258 aaKnown RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 SLC8A2Q9UPR5 921 aa28.94■■■□□ 2.22
USP42-204ENST00000451154 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.94■■■□□ 2.22
USP42-204ENST00000451154 F8VP50 259 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 EXOC3O60645 756 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 ATG13O75143 517 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 FAM163BP0C2L3 166 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 DRD1P21728 446 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 EML3Q32P44 896 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 C12orf56Q8IXR9 622 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 PLEKHO2Q8TD55 490 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 ATP2A3Q93084 1043 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 CEP295NLQ96MC4 621 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 CGNQ9P2M7 1197 aaKnown RBP28.93■■■□□ 2.22
USP42-204ENST00000451154 RCOR1Q9UKL0 485 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 CFAP45Q9UL16 551 aa28.93■■■□□ 2.22
USP42-204ENST00000451154 SPAG17Q6Q759 2223 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 TRIM66O15016 1216 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 PHACTR2O75167 634 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 CACNA2D1P54289 1103 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 ZXDBP98169 803 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 ATL3Q6DD88 541 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 CEP57L1Q8IYX8 460 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 FAM160A2Q8N612 972 aaPredicted RBP28.92■■■□□ 2.22
USP42-204ENST00000451154 XYLT2Q9H1B5 865 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 ARHGAP26Q9UNA1 814 aa28.92■■■□□ 2.22
USP42-204ENST00000451154 A8MXQ7 604 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 KLRC4O43908 158 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 C8orf48Q96LL4 319 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 TTLL2Q9BWV7 592 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 B3GNT5Q9BYG0 378 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 RNF38Q9H0F5 515 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 SEMA4GQ9NTN9 838 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 TMEM30AQ9NV96 361 aa28.91■■■□□ 2.22
USP42-204ENST00000451154 ZNF840PA6NDX5 716 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 CLDN5O00501 218 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 LRP3O75074 770 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 ABL1P00519 1130 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 SLFN14P0C7P3 912 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 STK4Q13043 487 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 EZH1Q92800 747 aaPredicted RBP28.9■■■□□ 2.22
USP42-204ENST00000451154 CD101Q93033 1021 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 SYAP1Q96A49 352 aaPredicted RBP28.9■■■□□ 2.22
USP42-204ENST00000451154 ELMO3Q96BJ8 720 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 PAGE5Q96GU1 130 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 ZNF518BQ9C0D4 1074 aa28.9■■■□□ 2.22
USP42-204ENST00000451154 DCDC2BA2VCK2 349 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 LEFTY2O00292 366 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 STAU1O95793 577 aaKnown RBP28.89■■■□□ 2.22
USP42-204ENST00000451154 TCF3P15923 654 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 ATICP31939 592 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 PDE6CP51160 858 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 CDH8P55286 799 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 NOP14P78316 857 aaKnown RBP28.89■■■□□ 2.22
USP42-204ENST00000451154 NR1H3Q13133 447 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 EXOC4Q96A65 974 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 EHD2Q9NZN4 543 aa28.89■■■□□ 2.22
USP42-204ENST00000451154 HELZP42694 1942 aaKnown RBP28.88■■■□□ 2.21
USP42-204ENST00000451154 AXIN1O15169 862 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 ACTN4O43707 911 aaKnown RBP28.88■■■□□ 2.21
USP42-204ENST00000451154 TAF10Q12962 218 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 BIRC3Q13489 604 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 CSRP2Q16527 193 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 FBXO43Q4G163 708 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 TDRD10Q5VZ19 366 aaKnown RBP28.88■■■□□ 2.21
USP42-204ENST00000451154 B3GALNT2Q8NCR0 500 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 RPLP0P6Q8NHW5 317 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 GOLGA5Q8TBA6 731 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 PARD3BQ8TEW8 1205 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 GAB3Q8WWW8 586 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 SMYD3Q9H7B4 428 aa28.88■■■□□ 2.21
USP42-204ENST00000451154 LRRIQ3A6PVS8 624 aaPredicted RBP28.87■■■□□ 2.21
USP42-204ENST00000451154 RPP40O75818 363 aaKnown RBP28.87■■■□□ 2.21
USP42-204ENST00000451154 PFKLP17858 780 aa28.87■■■□□ 2.21
USP42-204ENST00000451154 PPP3CCP48454 512 aa28.87■■■□□ 2.21
USP42-204ENST00000451154 IFRD2Q12894 506 aaPredicted RBP28.87■■■□□ 2.21
USP42-204ENST00000451154 PSMD2Q13200 908 aa28.87■■■□□ 2.21
USP42-204ENST00000451154 KMT5BQ4FZB7 885 aa28.87■■■□□ 2.21
USP42-204ENST00000451154 KIAA0895Q8NCT3 520 aa28.87■■■□□ 2.21
USP42-204ENST00000451154 HHIPQ96QV1 700 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms