RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF518BQ9C0D4 1074 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 EBF3Q9H4W6 596 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 PRMT8Q9NR22 394 aaPredicted RBP16.26■□□□□ 0.19
CHD3-205ENST00000449744 OBSL1O75147 1896 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 F5P12259 2224 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 CLDN5O00501 218 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 AKAP3O75969 853 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 HDCP19113 662 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
CHD3-205ENST00000449744 PSMC2P35998 433 aaKnown RBP16.25■□□□□ 0.19
CHD3-205ENST00000449744 PPP3CCP48454 512 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 USP46P62068 366 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
CHD3-205ENST00000449744 AMPD2Q01433 879 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 IFRD2Q12894 506 aaPredicted RBP16.25■□□□□ 0.19
CHD3-205ENST00000449744 MTF1Q14872 753 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 PDGFRLQ15198 375 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 SLITRK1Q96PX8 696 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 RBM12Q9NTZ6 932 aaKnown RBP16.25■□□□□ 0.19
CHD3-205ENST00000449744 ZSCAN32Q9NX65 697 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 PCDHGA2Q9Y5H1 932 aa16.25■□□□□ 0.19
CHD3-205ENST00000449744 C2orf78A6NCI8 922 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 ABL1P00519 1130 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 HLA-DRAP01903 254 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 PFKLP17858 780 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 CXCL12P48061 93 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 IFNAR2P48551 515 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 NRLP54845 237 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 PNOCQ13519 176 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 FAM35AQ86V20 835 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
CHD3-205ENST00000449744 CCDC150Q8NCX0 1101 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 SLC22A12Q96S37 553 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 FAM126AQ9BYI3 521 aaPredicted RBP16.24■□□□□ 0.19
CHD3-205ENST00000449744 SDCBP2Q9H190 292 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 MMRN2Q9H8L6 949 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 DUS2Q9NX74 493 aaKnown RBP16.24■□□□□ 0.19
CHD3-205ENST00000449744 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
CHD3-205ENST00000449744 HOOK1Q9UJC3 728 aaKnown RBP16.24■□□□□ 0.19
CHD3-205ENST00000449744 PTPRDP23468 1912 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 RTN3O95197 1032 aaPredicted RBP16.23■□□□□ 0.19
CHD3-205ENST00000449744 SMC2O95347 1197 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 ASS1P00966 412 aaKnown RBP16.23■□□□□ 0.19
CHD3-205ENST00000449744 TRIM49P0CI25 452 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 TRIM49CP0CI26 452 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 ARSAP15289 507 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 GCLMP48507 274 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 NDST1P52848 882 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 CACNA2D1P54289 1103 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 ENPEPQ07075 957 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 GRSF1Q12849 480 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD3-205ENST00000449744 TAF10Q12962 218 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 USP4Q13107 963 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 ZNF77Q15935 545 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 EDRF1Q3B7T1 1238 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 C1orf220Q5T0J3 134 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 SPOPLQ6IQ16 392 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 ACOT1Q86TX2 421 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 SMYD4Q8IYR2 804 aaPredicted RBP16.23■□□□□ 0.19
CHD3-205ENST00000449744 NUP93Q8N1F7 819 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 SYNPOQ8N3V7 929 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 CPA6Q8N4T0 437 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 SH3RF2Q8TEC5 729 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 OSCP1Q8WVF1 389 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
CHD3-205ENST00000449744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD3-205ENST00000449744 ARHGAP26Q9UNA1 814 aa16.23■□□□□ 0.19
CHD3-205ENST00000449744 GREB1Q4ZG55 1949 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 ZNF840PA6NDX5 716 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 CETN3O15182 167 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 EPB41P11171 864 aaKnown RBP16.22■□□□□ 0.19
CHD3-205ENST00000449744 YWHAQP27348 245 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 PPP3CAQ08209 521 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 UNC93AQ86WB7 457 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 ZBTB44Q8NCP5 570 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 PDZD8Q8NEN9 1154 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 ATP2A3Q93084 1043 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 FBXO32Q969P5 355 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 SMARCD1Q96GM5 515 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 GSDMAQ96QA5 445 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 TSG101Q99816 390 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 DNAI2Q9GZS0 605 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 CFAP54Q96N23 3096 aa16.22■□□□□ 0.19
CHD3-205ENST00000449744 FANCMQ8IYD8 2048 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 KIF26AQ9ULI4 1882 aaPredicted RBP16.21■□□□□ 0.19
CHD3-205ENST00000449744 STX10O60499 249 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 AP1G2O75843 785 aa16.21■□□□□ 0.19
CHD3-205ENST00000449744 TCF3P15923 654 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms