RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RPP40O75818 363 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 H2AFZP0C0S5 128 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 MNX1P50219 401 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARHGAP8P85298 464 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TDGQ13569 410 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 H2AFVQ71UI9 128 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCDC13Q8IYE1 715 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 SMARCD1Q96GM5 515 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CEP63Q96MT8 703 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 NAP1L3Q99457 506 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 RALGAPA1Q6GYQ0 2036 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 A0A0U1RQF3 1178 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 AP5Z1O43299 807 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 IFNB1P01574 187 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAGEA1P43355 309 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 RGS7P49802 495 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CBX2Q14781 532 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TPGS2Q68CL5 300 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PKN3Q6P5Z2 889 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAIP1Q8WWC4 291 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 RSAD2Q8WXG1 361 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CENPKQ9BS16 269 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ACE2Q9BYF1 805 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 IQCGQ9H095 443 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARHGEF4Q9NR80 690 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PTPRJQ12913 1337 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 GJB6O95452 261 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CER1O95813 267 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCNYL3P0C7X3 344 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ACAT1P24752 427 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 WDR5P61964 334 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP1R7Q15435 360 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 NUGGCQ68CJ6 796 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANKS6Q68DC2 871 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 IGSF22Q8N9C0 903 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF579Q8NAF0 562 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TBC1D13Q9NVG8 400 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 SORCS3Q9UPU3 1222 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PCDHA5Q9Y5H7 936 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ROBO3Q96MS0 1386 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 THSD7AQ9UPZ6 1657 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 FBXO21O94952 628 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 HLA-DRAP01903 254 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM49P0CI25 452 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM49CP0CI26 452 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 SNHG28P0DPA3 235 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PSMA2P25787 234 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAP4P27816 1152 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 BRCC3P46736 316 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 AP1B1Q10567 949 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 GUF1Q8N442 669 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATP6V1E2Q96A05 226 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PRRG4Q9BZD6 226 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM134Q9H6X4 195 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 IGSF9Q9P2J2 1179 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 WDR35Q9P2L0 1181 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 GPSM3Q9Y4H4 160 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PSMD12O00232 456 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 VPS4BO75351 444 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 AARSP49588 968 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF75DP51815 510 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 DUSP4Q13115 394 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TAF8Q7Z7C8 310 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CEP112Q8N8E3 955 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYFIP2Q96F07 1278 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 TUBGCP2Q9BSJ2 902 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 MTMR12Q9C0I1 747 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 C8orf33Q9H7E9 229 aaPredicted RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 SARS2Q9NP81 518 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 VPS4AQ9UN37 437 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 R4GN57 208 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 LRP5O75197 1615 aa5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 NEDD8-MDP1E9PL57 170 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 HAX1O00165 279 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYTH3O43739 400 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 KCNA2P16389 499 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYB5D1Q6P9G0 228 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 RFX6Q8HWS3 928 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 KCNS3Q9BQ31 491 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYP3A43Q9HB55 503 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 USP27XA6NNY8 438 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 F9P00740 461 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARF4P18085 180 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PSEN1P49768 467 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NLRP12P59046 1061 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CALCOCO2Q13137 446 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ACOX1Q15067 660 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 LAYNQ6UX15 382 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 OSCP1Q8WVF1 389 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM56Q9BRZ2 755 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPATA16Q9BXB7 569 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NDFIP2Q9NV92 336 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TSR3Q9UJK0 312 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 APPL1Q9UKG1 709 aa5.88□□□□□ -1.47
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