RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 ZFATQ9P243 1243 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 NXF1Q9UBU9 619 aaKnown RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 EFR3BQ9Y2G0 817 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 GSC2O15499 205 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 RBP3P10745 1247 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 ATP6V1C1P21283 382 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 ASPAP45381 313 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 HMGCS2P54868 508 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 TRPC3Q13507 836 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 DPYSL3Q14195 570 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 SGSM1Q2NKQ1 1148 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 KCTD6Q8NC69 237 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 FBXO41Q8TF61 875 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 CPXM1Q96SM3 734 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 CYTH2Q99418 400 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 TMEM134Q9H6X4 195 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 METTL5Q9NRN9 209 aaKnown RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 KBTBD13C9JR72 458 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 DHRS4L1P0CG22 281 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 PYGBP11216 843 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 NEFHP12036 1026 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 ZBTB16Q05516 673 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 TAZQ16635 292 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 DUOXA2Q1HG44 320 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 ZNF699Q32M78 642 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
PBX3-207ENST00000447726 CALN1Q9BXU9 219 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 PHACTR1Q9C0D0 580 aa17.11■□□□□ 0.33
PBX3-207ENST00000447726 MSCO60682 206 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 FAM155BO75949 473 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 NEK3P51956 506 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 OSTNP61366 133 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 MMRN1Q13201 1228 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 SH2D5Q6ZV89 423 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 ZC3H18Q86VM9 953 aaKnown RBP17.1■□□□□ 0.33
PBX3-207ENST00000447726 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 DNAJC9Q8WXX5 260 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 SKA1Q96BD8 255 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 NSL1Q96IY1 281 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 PCYT2Q99447 389 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 XYLT2Q9H1B5 865 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 STRIP2Q9ULQ0 834 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.1■□□□□ 0.33
PBX3-207ENST00000447726 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 E5RJQ4 531 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 GYG2O15488 501 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 MIPP30301 263 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 TUBP50607 506 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 CDH8P55286 799 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 KPNB1Q14974 876 aaKnown RBP17.1■□□□□ 0.33
PBX3-207ENST00000447726 PRKD1Q15139 912 aaPredicted RBP17.1■□□□□ 0.33
PBX3-207ENST00000447726 ACSBG2Q5FVE4 666 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 NBPF12Q5TAG4 269 aaPredicted RBP17.1■□□□□ 0.33
PBX3-207ENST00000447726 RINLQ6ZS11 566 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 CDHR3Q6ZTQ4 885 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 PRPF39Q86UA1 669 aaKnown RBP17.1■□□□□ 0.33
PBX3-207ENST00000447726 THNSL1Q8IYQ7 743 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 ARMCX1Q9P291 453 aa17.1■□□□□ 0.33
PBX3-207ENST00000447726 TOM1L1O75674 476 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 KRT36O76013 467 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 ERBB2P04626 1255 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
PBX3-207ENST00000447726 CDK16Q00536 496 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 RCN1Q15293 331 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 CDR2LQ86X02 465 aaPredicted RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 TEX9Q8N6V9 391 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 APOPT1Q96IL0 206 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 ZNF668Q96K58 619 aaPredicted RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 NMRK1Q9NWW6 199 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 FAM237BA0A1B0GVD1 139 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 APOC4-APOC2K7ER74 178 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 HNRNPCL1O60812 293 aaKnown RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 APOC2P02655 101 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 AP3M2P53677 418 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
PBX3-207ENST00000447726 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 ZPBP2Q6X784 338 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 YIPF3Q9GZM5 350 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 SYNCQ9H7C4 482 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
PBX3-207ENST00000447726 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.33
PBX3-207ENST00000447726 MCF2LO15068 1137 aa17.08■□□□□ 0.33
PBX3-207ENST00000447726 PEX10O60683 326 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms