RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 DPYSL4O14531 572 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 HPDP32754 393 aaPredicted RBP20.48■□□□□ 0.87
FAM3A-215ENST00000447601 NBPF20Q3BBV1 942 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 CXCL17Q6UXB2 119 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 PGM2Q96G03 612 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 CDC42EP4Q9H3Q1 356 aaKnown RBP20.48■□□□□ 0.87
FAM3A-215ENST00000447601 ABT1Q9ULW3 272 aaKnown RBP20.48■□□□□ 0.87
FAM3A-215ENST00000447601 NOVA2Q9UNW9 492 aaKnown RBP20.48■□□□□ 0.87
FAM3A-215ENST00000447601 CDY2AQ9Y6F7 541 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
FAM3A-215ENST00000447601 GRIN2DO15399 1336 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 PIK3R2O00459 728 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 SPTLC1O15269 473 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 HUS1O60921 280 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 CAPN15O75808 1086 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 RPLP2P05387 115 aaKnown RBP20.47■□□□□ 0.87
FAM3A-215ENST00000447601 RARBP10826 455 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 LRPAP1P30533 357 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 CHKAP35790 457 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 BCAT1P54687 386 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 SLC6A3Q01959 620 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 PDE4CQ08493 712 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 BST2Q10589 180 aaKnown RBP20.47■□□□□ 0.87
FAM3A-215ENST00000447601 LIMS2Q7Z4I7 341 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 SLC35B2Q8TB61 432 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 HAUS1Q96CS2 278 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 NCAPGQ9BPX3 1015 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 DPEP3Q9H4B8 488 aa20.47■□□□□ 0.87
FAM3A-215ENST00000447601 CWC15Q9P013 229 aaKnown RBP20.47■□□□□ 0.87
FAM3A-215ENST00000447601 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 TULP2O00295 520 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 CST8O60676 142 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PGK1P00558 417 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 NKX3-2P78367 333 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 SOX4Q06945 474 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 P3H1Q32P28 736 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 C6orf118Q5T5N4 469 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 HIBCHQ6NVY1 386 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 HACE1Q8IYU2 909 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ANKRD52Q8NB46 1076 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ARRDC4Q8NCT1 418 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 HSPH1Q92598 858 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 TLCD1Q96CP7 247 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PIWIL1Q96J94 861 aaKnown RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 TNIP3Q96KP6 325 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PRDM4Q9UKN5 801 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 SEPT4O43236 478 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PRPSAP2O60256 369 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 FGFR1P11362 822 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ARSEP51690 589 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 DYNLT1P63172 113 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 GDF6Q6KF10 455 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 TRNP1Q6NT89 227 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ADGRF2Q8IZF7 708 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 TOP6BLQ8N6T0 577 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ROPN1BQ9BZX4 212 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ARHGAP39Q9C0H5 1083 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 STMN4Q9H169 189 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 ROPN1Q9HAT0 212 aaPredicted RBP20.46■□□□□ 0.87
FAM3A-215ENST00000447601 GOLGA2P5Q9HBQ8 144 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 PCDH9Q9HC56 1237 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 CYLDQ9NQC7 956 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 CHST12Q9NRB3 414 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 CALCOCO1Q9P1Z2 691 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 GABRQQ9UN88 632 aa20.46■□□□□ 0.87
FAM3A-215ENST00000447601 DNALI1O14645 258 aaPredicted RBP20.45■□□□□ 0.86
FAM3A-215ENST00000447601 CAND2O75155 1236 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 ALDH1A1P00352 501 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 PDGFRBP09619 1106 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 SDC4P31431 198 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 MDH1P40925 334 aaKnown RBP20.45■□□□□ 0.86
FAM3A-215ENST00000447601 FLT3LGP49771 235 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 LILRA4P59901 499 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 MAGOHP61326 146 aaKnown RBP20.45■□□□□ 0.86
FAM3A-215ENST00000447601 PPP2R2AP63151 447 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 OTUD4Q01804 1114 aaKnown RBP20.45■□□□□ 0.86
FAM3A-215ENST00000447601 RFX6Q8HWS3 928 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 RELL1Q8IUW5 271 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 ZCCHC9Q8N567 271 aaKnown RBP20.45■□□□□ 0.86
FAM3A-215ENST00000447601 ACTL9Q8TC94 416 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 SLC38A7Q9NVC3 462 aa20.45■□□□□ 0.86
FAM3A-215ENST00000447601 APOC4-APOC2K7ER74 178 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 SGK1O00141 431 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 PTGESO14684 152 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 RGS16O15492 202 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 PAPSS1O43252 624 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 GRAP2O75791 330 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 TTC4O95801 387 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 APOC2P02655 101 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 CD48P09326 243 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 FAM163BP0C2L3 166 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 WARSP23381 471 aaKnown RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 SCNN1AP37088 669 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 CDR1P51861 262 aa20.44■□□□□ 0.86
FAM3A-215ENST00000447601 HNRNPH2P55795 449 aaKnown RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 C15orf59Q2T9L4 293 aaPredicted RBP20.44■□□□□ 0.86
FAM3A-215ENST00000447601 CCDC14Q49A88 953 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms