RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 A0A087WZ62 844 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 A0A0B4J269 797 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 A0A0U1RQG5 324 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FAM234BA2RU67 622 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PLSCR1O15162 318 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FOXD2O60548 495 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PPFIA4O75335 1185 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 SKAP2O75563 359 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CDKL5O76039 1030 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 NDST3O95803 873 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PEX11BO96011 259 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 LAG3P18627 525 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PTMSP20962 102 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 KCNA3P22001 575 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 DDX6P26196 483 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 GABRB3P28472 473 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CD6P30203 668 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 VAV2P52735 878 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FSTL1Q12841 308 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 MYO1EQ12965 1108 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FZD5Q13467 585 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 TUBB3Q13509 450 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 BLMHQ13867 455 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PUM3Q15397 648 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 USP39Q53GS9 565 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 INO80DQ53TQ3 878 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PRR16Q569H4 304 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CACHD1Q5VU97 1274 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 KRT73Q86Y46 540 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 PALM2Q8IXS6 379 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FAM109AQ8N4B1 249 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 EXTL1Q92935 676 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 MUL1Q969V5 352 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 FUBP1Q96AE4 644 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 MYEOVQ96EZ4 313 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 SNX27Q96L92 541 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 C1QTNF3Q9BXJ4 246 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CXorf36Q9H7Y0 433 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 UNKLQ9H9P5 680 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 NECTIN3Q9NQS3 549 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 INTS13Q9NVM9 706 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 RGL1Q9NZL6 768 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 DKK2Q9UBU2 259 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 NDRG4Q9ULP0 352 aaKnown RBP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 TSC22D4Q9Y3Q8 395 aa5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 AQRO60306 1485 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P16-201ENST00000447155 CCDC7Q96M83 1385 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 SCAPERQ9BY12 1400 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ADGBQ8N7X0 1667 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 TRGV11A0A075B6L2 103 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 hCG_1642624A0A1W2PR95 340 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 hCG_1984214I3L0E3 225 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 PODXLO00592 558 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 NBNO60934 754 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 PIAS2O75928 621 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 RASAL1O95294 804 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 CSTBP04080 98 aaKnown RBP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZNF20P17024 532 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 PRKAG1P54619 331 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 SLC25A3Q00325 362 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 E2F2Q14209 437 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 CDSNQ15517 529 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ELF2Q15723 593 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZNF750Q32MQ0 723 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 TUBB8Q3ZCM7 444 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 SPDYAQ5MJ70 313 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 RBM20Q5T481 1227 aaKnown RBP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ARHGAP40Q5TG30 622 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 TAF3Q5VWG9 929 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ICE2Q659A1 982 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 CCDC174Q6PII3 467 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 KCTD20Q7Z5Y7 419 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ANKRD42Q8N9B4 389 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ANP32BQ92688 251 aaKnown RBP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 PPP2R3CQ969Q6 453 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 C18orf8Q96DM3 657 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 ADAM2Q99965 735 aa5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 MRPS17Q9Y2R5 130 aaKnown RBP5.16□□□□□ -1.58
HMGB1P16-201ENST00000447155 CUL7Q14999 1698 aa5.15□□□□□ -1.58
HMGB1P16-201ENST00000447155 TMEM200CA6NKL6 621 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 RGS10O43665 173 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 CREB3O43889 395 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 NR4A1P22736 598 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 PDIA3P30101 505 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 CHKAP35790 457 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 HALP42357 657 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 GRK6P43250 576 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 TERF1P54274 439 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 RRP1P56182 461 aaKnown RBP5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 ADAM17P78536 824 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 EFEMP1Q12805 493 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 RAB30Q15771 203 aa5.15□□□□□ -1.59
HMGB1P16-201ENST00000447155 TIGD2Q4W5G0 525 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms