RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
SMC6-206ENST00000446852 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
SMC6-206ENST00000446852 HESX1Q9UBX0 185 aa18.33■□□□□ 0.52
SMC6-206ENST00000446852 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 TRUB2O95900 331 aaKnown RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 SETSIPP0DME0 302 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 NR1D1P20393 614 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 IGFBP6P24592 240 aaPredicted RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 GNL1P36915 607 aaPredicted RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 ATP1A2P50993 1020 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 LILRA4P59901 499 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SKOR1P84550 965 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SLMAPQ14BN4 828 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 OASLQ15646 514 aaKnown RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 GSTA5Q7RTV2 222 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SCUBE3Q8IX30 993 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 CRYBG2Q8N1P7 616 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.522e-6■□□□□ 10.6
SMC6-206ENST00000446852 PPP1R10Q96QC0 940 aaKnown RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 MIS12Q9H081 205 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SPC25Q9HBM1 224 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 ASNSD1Q9NWL6 643 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SAE1Q9UBE0 346 aaPredicted RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 PAPSS1O43252 624 aaPredicted RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 EIF3BP55884 814 aaKnown RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 DYNLT1P63172 113 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 NKX3-2P78367 333 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 SV2CQ496J9 727 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 CCDC89Q8N998 374 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 CMASQ8NFW8 434 aaPredicted RBP18.32■□□□□ 0.52
SMC6-206ENST00000446852 HSPH1Q92598 858 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 XPNPEP3Q9NQH7 507 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 CACNG4Q9UBN1 327 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 ZNF148Q9UQR1 794 aa18.32■□□□□ 0.52
SMC6-206ENST00000446852 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 RIPK2O43353 540 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 ADORA2BP29275 332 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 PCK1P35558 622 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 ACTN2P35609 894 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 VCPP55072 806 aaKnown RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 EMC10Q5UCC4 262 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 ALLCQ8N6M5 410 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 GSTCDQ8NEC7 633 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 CFAP57Q96MR6 1250 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 TRAIPQ9BWF2 469 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 CAPS2Q9BXY5 557 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 ANAPC5Q9UJX4 755 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 EFR3BQ9Y2G0 817 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 ASGR1P07306 291 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 CDO1Q16878 200 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 CCDC14Q49A88 953 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 TTC19Q6DKK2 380 aaPredicted RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 OSTM1Q86WC4 334 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 NKD2Q969F2 451 aaPredicted RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 PWWP2AQ96N64 755 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 SNX25Q9H3E2 840 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 CDC42EP4Q9H3Q1 356 aaKnown RBP18.31■□□□□ 0.52
SMC6-206ENST00000446852 FAM105AQ9NUU6 356 aa18.31■□□□□ 0.52
SMC6-206ENST00000446852 DCDC2CA8MYV0 355 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 CST8O60676 142 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
SMC6-206ENST00000446852 ZSCAN5DPP0CG00 497 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 ELNP15502 786 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 LRPAP1P30533 357 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 SLC6A3Q01959 620 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 LMNB2Q03252 620 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 MGAT3Q09327 533 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 IZUMO3Q5VZ72 239 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 BBS12Q6ZW61 710 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 RSPH3Q86UC2 560 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 KCTD6Q8NC69 237 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 UHMK1Q8TAS1 419 aaKnown RBP18.3■□□□□ 0.52
SMC6-206ENST00000446852 SLC35B2Q8TB61 432 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 STK32AQ8WU08 396 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 HHIPL1Q96JK4 782 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMC6-206ENST00000446852 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 TMEM88BA6NKF7 163 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 HUS1O60921 280 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 ETS1P14921 441 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 MLH1P40692 756 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 CAV1Q03135 178 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 P3H1Q32P28 736 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 AGBL2Q5U5Z8 902 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 ANKRD52Q8NB46 1076 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 ACTL9Q8TC94 416 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 CLEC4CQ8WTT0 213 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 TMEM121Q9BTD3 319 aa18.3■□□□□ 0.52
SMC6-206ENST00000446852 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms