RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TAP1Q03518 808 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 PUM3Q15397 648 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 NPY5RQ15761 445 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 VRK3Q8IV63 474 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 CLASRPQ8N2M8 674 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 PTCD3Q96EY7 689 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 MPP4Q96JB8 637 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 Q96MF0 132 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 NELL2Q99435 816 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 DHX36Q9H2U1 1008 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 PNPLA8Q9NP80 782 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 SNX13Q9Y5W8 968 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 TRIAP1O43715 76 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 CSF1RP07333 972 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 TNFSF4P23510 183 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 CASP2P42575 452 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 DGKEP52429 567 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 MYO1EQ12965 1108 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 PLA1AQ53H76 456 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 PRR16Q569H4 304 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 JAKMIP3Q5VZ66 844 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 FCRL6Q6DN72 434 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 SFRP4Q6FHJ7 346 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 PCSK4Q6UW60 755 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 UNC13DQ70J99 1090 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 MPP5Q8N3R9 675 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 PPHLN1Q8NEY8 458 aaKnown RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 MYCBPAPQ8TBZ2 947 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 RAPGEF4Q8WZA2 1011 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 TRIM63Q969Q1 353 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 KIAA1191Q96A73 305 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 FAM136AQ96C01 138 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 SNX22Q96L94 193 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 ISCA1Q9BUE6 129 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 INO80BQ9C086 356 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 CXorf36Q9H7Y0 433 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 CERS4Q9HA82 394 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 AGO4Q9HCK5 861 aaKnown RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 ALG13Q9NP73 1137 aaKnown RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 SERHLQ9NQF3 203 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 NDRG4Q9ULP0 352 aaKnown RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 CAPN11Q9UMQ6 739 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 TBC1D30Q9Y2I9 924 aa5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 EPN1Q9Y6I3 576 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P48-201ENST00000446155 FER1L4A9Z1Z3 1794 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 LOC102723971A0A1B0GUV8 181 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 POM121BA6NF01 834 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 VWC2LB2RUY7 222 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 CCP110O43303 1012 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 AGR2O95994 175 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 ANXA2P07355 339 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 LDHCP07864 332 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 PARP1P09874 1014 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 HKR1P10072 659 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 HSD3B1P14060 373 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 ABCB4P21439 1286 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 KCNA3P22001 575 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MPLP40238 635 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 STT3AP46977 705 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 CARSP49589 748 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 SEC24CP53992 1094 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 FOXI1Q12951 378 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MGAT5BQ3V5L5 792 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 L1TD1Q5T7N2 865 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 IZUMO3Q5VZ72 239 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 TLDC1Q6P9B6 456 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 LAYNQ6UX15 382 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 Q6ZNX1 250 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 DTX2Q86UW9 622 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MYCT1Q8N699 235 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 BEND2Q8NDZ0 799 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 SKA1Q96BD8 255 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 TBATAQ96M53 351 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 AIFM2Q9BRQ8 373 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 STK31Q9BXU1 1019 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MYLK2Q9H1R3 596 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 STARD7Q9NQZ5 370 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 DNMT3BQ9UBC3 853 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MYO1AQ9UBC5 1043 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 TESQ9UGI8 421 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MID2Q9UJV3 735 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 CDC23Q9UJX2 597 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 PADI4Q9UM07 663 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 MRPS17Q9Y2R5 130 aaKnown RBP5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 HS3ST3A1Q9Y663 406 aa5.25□□□□□ -1.57
HMGB1P48-201ENST00000446155 ADGRA2Q96PE1 1338 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 CLCA1A8K7I4 914 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 NCK2O43639 380 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 A1BGP04217 495 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 FGFR2P21802 821 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ACVR2AP27037 513 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 ADRA1BP35368 520 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 DDIT3P35638 169 aa5.24□□□□□ -1.57
HMGB1P48-201ENST00000446155 NXPH1P58417 271 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms