RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 STARD13Q9Y3M8 1113 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 COL1A1P02452 1464 aaPredicted RBP17.31■□□□□ 0.36
TCOF1-206ENST00000445265 MTSS1O43312 755 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 SLC26A2P50443 739 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PREPLQ4J6C6 727 aaPredicted RBP17.31■□□□□ 0.36
TCOF1-206ENST00000445265 TMEM120AQ9BXJ8 343 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 DPP3Q9NY33 737 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 EEF2KO00418 725 aaKnown RBP17.3■□□□□ 0.36
TCOF1-206ENST00000445265 TGFB3P10600 412 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 PYGBP11216 843 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 CNTFP26441 200 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ORC1Q13415 861 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 LRRC23Q53EV4 343 aaPredicted RBP17.3■□□□□ 0.36
TCOF1-206ENST00000445265 METTL7BQ6UX53 244 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 RXFP2Q8WXD0 754 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 C5P01031 1676 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ELK3P41970 407 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ZACNQ401N2 412 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 MFSD5Q6N075 450 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
TCOF1-206ENST00000445265 NSMCE4AQ9NXX6 385 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
TCOF1-206ENST00000445265 SLC30A9Q6PML9 568 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 PCDHB18PQ96TA0 734 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 MRGBPQ9NV56 204 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 DLGAP2Q9P1A6 1054 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 BAG5Q9UL15 447 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 L3MBTL1Q9Y468 752 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 COPAP53621 1224 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 TSPY1Q01534 308 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 LAMTOR4Q0VGL1 99 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 ACAP1Q15027 740 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 PHF13Q86YI8 300 aaPredicted RBP17.3■□□□□ 0.36
TCOF1-206ENST00000445265 FAM172AQ8WUF8 416 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 SAR1AQ9NR31 198 aa17.3■□□□□ 0.36
TCOF1-206ENST00000445265 F8VP50 259 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 MYL3P08590 195 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 HADHBP55084 474 aaKnown RBP17.29■□□□□ 0.36
TCOF1-206ENST00000445265 RTP1P59025 263 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SETD3Q86TU7 594 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-206ENST00000445265 INPP5DQ92835 1189 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-206ENST00000445265 KREMEN1Q96MU8 473 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SH3GL3Q99963 347 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 TMEM109Q9BVC6 243 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SUN2Q9UH99 717 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 LIASO43766 372 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 CLCN3P51790 818 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 RASA2Q15283 850 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 QPCTQ16769 361 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 KIRREL3Q8IZU9 778 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 EXT2Q93063 718 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.29■□□□□ 0.363e-9■■■■■ 78.5
TCOF1-206ENST00000445265 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SIK2Q9H0K1 926 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 PORCNQ9H237 461 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 ANGPTL3Q9Y5C1 460 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 ARHGAP10A1A4S6 786 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 WNT10BO00744 389 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 TBC1D12O60347 775 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 PAEPP09466 180 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 BGNP21810 368 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 CHKAP35790 457 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 ZNF484Q5JVG2 852 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 ZNF669Q96BR6 464 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SLITRK1Q96PX8 696 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SIX2Q9NPC8 291 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.29■□□□□ 0.36
TCOF1-206ENST00000445265 DCDC2Q9UHG0 476 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 PCDHA2Q9Y5H9 948 aa17.29■□□□□ 0.36
TCOF1-206ENST00000445265 SDR42E2A6NKP2 422 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 APOC4-APOC2K7ER74 178 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 APOC2P02655 101 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 TRIP10Q15642 601 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 DCAF6Q58WW2 860 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 C16orf89Q6UX73 402 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 APOPT1Q96IL0 206 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 TBCBQ99426 244 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 DMAC2Q9NW81 257 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 IGLV3-22A0A075B6J6 115 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 GJB6O95452 261 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 ALADP13716 330 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 USP10Q14694 798 aaKnown RBP17.28■□□□□ 0.36
TCOF1-206ENST00000445265 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 COG5Q9UP83 839 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 SH3BP5O60239 455 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 CASP2P42575 452 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 CNGA3Q16281 694 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 TMEM134Q9H6X4 195 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 ASTN2O75129 1339 aaPredicted RBP17.28■□□□□ 0.36
TCOF1-206ENST00000445265 SLIT2O94813 1529 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms