RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 F7P08709 466 aaPredicted RBP12.15□□□□□ -0.46
HCFC1-203ENST00000444191 KCNA4P22459 653 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 CACNA2D1P54289 1103 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 XKR3Q5GH77 459 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 SLC39A4Q6P5W5 647 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 RIBC1Q8N443 379 aaPredicted RBP12.15□□□□□ -0.46
HCFC1-203ENST00000444191 DNAAF3Q8N9W5 541 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 SRPK1Q96SB4 655 aaKnown RBP12.15□□□□□ -0.46
HCFC1-203ENST00000444191 AKT3Q9Y243 479 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 C2CD2Q9Y426 696 aa12.15□□□□□ -0.46
HCFC1-203ENST00000444191 TPBGLP0DKB5 382 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 MAPTP10636 758 aaKnown RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 IVDP26440 423 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 NOVP48745 357 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 CNTN2Q02246 1040 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 CUL3Q13618 768 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 ZACNQ401N2 412 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 ATG16L1Q676U5 607 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 SCARA3Q6AZY7 606 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 LRRC74BQ6ZQY2 392 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 WDR75Q8IWA0 830 aaKnown RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 ALLCQ8N6M5 410 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 SCYL1Q96KG9 808 aa12.15□□□□□ -0.47
HCFC1-203ENST00000444191 APOBEC2Q9Y235 224 aaKnown RBP12.15□□□□□ -0.47
HCFC1-203ENST00000444191 PTPRJQ12913 1337 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 PEX11AO75192 247 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 KRT38O76015 456 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 SNUPNO95149 360 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 ASPHQ12797 758 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 STX3Q13277 289 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 TRIP10Q15642 601 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 TCHHL1Q5QJ38 904 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 RAPH1Q70E73 1250 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 KLC2Q9H0B6 622 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 RPF1Q9H9Y2 349 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 AVENQ9NQS1 362 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 ANGPTL2Q9UKU9 493 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 NENFQ9UMX5 172 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 LMNAP02545 664 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 ATP6V1B1P15313 513 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 MSX2P35548 267 aaPredicted RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 PEX6Q13608 980 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 TTC13Q8NBP0 860 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 MAGEC3Q8TD91 643 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 CADM1Q9BY67 442 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 NIF3L1Q9GZT8 377 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 DDX56Q9NY93 547 aaKnown RBP12.14□□□□□ -0.47
HCFC1-203ENST00000444191 GRID1Q9ULK0 1009 aa12.14□□□□□ -0.47
HCFC1-203ENST00000444191 DHX15O43143 795 aaKnown RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 ITGB3P05106 788 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 PRKCBP05771 671 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 STAT5BP51692 787 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 IFRD2Q12894 506 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GRIK3Q13003 919 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 UBAP2LQ14157 1087 aaKnown RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 MON1BQ7L1V2 547 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 ZNF677Q86XU0 584 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 CCNJLQ8IV13 435 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GOLGA8QA0A0J9YX86 632 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GOLGA8OA6NCC3 632 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GOLGA8NF8WBI6 632 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 CREB3O43889 395 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 OSBPP22059 807 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 MIPP30301 263 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 OGDHQ02218 1023 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 STXBP2Q15833 593 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 SH3PXD2AQ5TCZ1 1133 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 KDELC2Q7Z4H8 507 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 PGBD4Q96DM1 585 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 USP18Q9UMW8 372 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 hCG_1818297A0A087WSY0 165 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 AIM2O14862 343 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 LYPLA1O75608 230 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-203ENST00000444191 CXCL8P10145 99 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 GARTP22102 1010 aa12.13□□□□□ -0.47
HCFC1-203ENST00000444191 SOX11P35716 441 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms