RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 NFATC1O95644 943 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 PDGFRBP09619 1106 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 ARSAP15289 507 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 PTPN1P18031 435 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 ATXN1P54253 815 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 PSMC1P62191 440 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 CLDN10P78369 228 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SLC7A9P82251 487 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 DMWDQ09019 674 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SPEM2Q0P670 501 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 EML3Q32P44 896 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 CACNA2D4Q7Z3S7 1137 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 DDX42Q86XP3 938 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SLC9A9Q8IVB4 645 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 STKLD1Q8NE28 680 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 CD101Q93033 1021 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 ACDQ96AP0 544 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 CHFRQ96EP1 664 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SLITRK1Q96PX8 696 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SLC39A2Q9NP94 309 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 SEMA4GQ9NTN9 838 aa17.4■□□□□ 0.38
CTDSP1-204ENST00000443891 C2orf78A6NCI8 922 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 ZNF840PA6NDX5 716 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 SLC9A3R1O14745 358 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 HCRTO43612 131 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 PHACTR2O75167 634 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 OLFM2O95897 454 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 TDRD10Q5VZ19 366 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 HEATR6Q6AI08 1181 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 SYT13Q7L8C5 426 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 PDZD8Q8NEN9 1154 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 RIN3Q8TB24 985 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 TNIP3Q96KP6 325 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 SLC22A12Q96S37 553 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 MRPL45Q9BRJ2 306 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 XYLT2Q9H1B5 865 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 ATP8B3O60423 1300 aa17.39■□□□□ 0.37
CTDSP1-204ENST00000443891 A8MXQ7 604 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 F8VP50 259 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 RNF40O75150 1001 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 RPP40O75818 363 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 RTN3O95197 1032 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 KIF20AO95235 890 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 EGFP01133 1207 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 CUL4BQ13620 913 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 LPAL2Q16609 132 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 CCDC142Q17RM4 750 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 MDH1BQ5I0G3 518 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 PARD3BQ8TEW8 1205 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 DMAC2Q9NW81 257 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 C2orf42Q9NWW7 574 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 EBF1Q9UH73 591 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 PCDHGA5Q9Y5G8 931 aa17.38■□□□□ 0.37
CTDSP1-204ENST00000443891 FRYLO94915 3013 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 MED19A0JLT2 244 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 PDXKO00764 312 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 SLC30A4O14863 429 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 RPN1P04843 607 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 P4HA1P13674 534 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 EIF2DP41214 584 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 AFMP43652 599 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 MYL6P60660 151 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 ZNF667Q5HYK9 610 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 PRR23CQ6ZRP0 262 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 NUP93Q8N1F7 819 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 FAM160A2Q8N612 972 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 TAF4BQ92750 862 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 ZC3H10Q96K80 434 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 EXOC1Q9NV70 894 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 WNT6Q9Y6F9 365 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 DMXL1Q9Y485 3027 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 OBSL1O75147 1896 aa17.37■□□□□ 0.37
CTDSP1-204ENST00000443891 LEFTY2O00292 366 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 IKBKBO14920 756 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 OAS1P00973 400 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 TRIM21P19474 475 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 CMA1P23946 247 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 RAP1GAPP47736 663 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 USP46P62068 366 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 ZNF699Q32M78 642 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 SNX30Q5VWJ9 437 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 PKN3Q6P5Z2 889 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 C11orf74Q86VG3 221 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 TMC2Q8TDI7 906 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 FBRSL1Q9HCM7 1045 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 TBC1D14Q9P2M4 693 aa17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 NXF1Q9UBU9 619 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-204ENST00000443891 AXIN1O15169 862 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms