RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PTPN20Q4JDL3 420 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 BOLA3Q53S33 107 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 BZW1Q7L1Q6 419 aaKnown RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 TMC3Q7Z5M5 1100 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 NPLOC4Q8TAT6 608 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■□□ 14.8
CALD1-210ENST00000443197 BAIAP2L1Q9UHR4 511 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 COQ4Q9Y3A0 265 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 DDX3YO15523 660 aaKnown RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 CCNG2Q16589 344 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 SLC10A6Q3KNW5 377 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 ATP11CQ8NB49 1132 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 CAVIN3Q969G5 261 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 CPXM1Q96SM3 734 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 PITPNM3Q9BZ71 974 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 PIH1D1Q9NWS0 290 aaKnown RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 NUDT5Q9UKK9 219 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 MYH7BA7E2Y1 1941 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 SCN9AQ15858 1988 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 ARHGEF37A1IGU5 675 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 H3BRJ5 948 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 SUN1O94901 812 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 TROVE2P10155 538 aaKnown RBP eCLIP11.07□□□□□ -0.64
CALD1-210ENST00000443197 PCSK1P29120 753 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 BCAT1P54687 386 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 PRPSAP1Q14558 356 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 PGBD4Q96DM1 585 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 SCYL1Q96KG9 808 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 MRPL45Q9BRJ2 306 aaKnown RBP11.07□□□□□ -0.64
CALD1-210ENST00000443197 CACNG4Q9UBN1 327 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 KIAA1257Q9ULG3 409 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 BNIP3LO60238 219 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 WNT7BP56706 349 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 FKBP1BP68106 108 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PTGISQ16647 500 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 EFHC1Q5JVL4 640 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PPP1R26Q5T8A7 1209 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 TAF2Q6P1X5 1199 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 LMO3Q8TAP4 145 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 SOCS4Q8WXH5 440 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 CCT8L2Q96SF2 557 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 ADAM2Q99965 735 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PLEKHA5Q9HAU0 1116 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 R3HDM2Q9Y2K5 976 aaKnown RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 LAMB2P55268 1798 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 CLDN5O00501 218 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 CES2O00748 559 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 TSPAN1O60635 241 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 SYF2O95926 243 aaKnown RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 MMP8P22894 467 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 TKTL1P51854 596 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 C1orf220Q5T0J3 134 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 SYDE1Q6ZW31 735 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 FBXL18Q96ME1 805 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 SEPT5Q99719 369 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 NCAPGQ9BPX3 1015 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■□□□□ 8.8
CALD1-210ENST00000443197 SLC12A6Q9UHW9 1150 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 ADAMTS5Q9UNA0 930 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 B4GALT4O60513 344 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PAEPP09466 180 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 EPHB2P29323 1055 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 TTC25Q96NG3 672 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PGLYRP2Q96PD5 576 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 LPIN3Q9BQK8 851 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 FZD8Q9H461 694 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 PRDM5Q9NQX1 630 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 TJP2Q9UDY2 1190 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 TMEM120BA0PK00 339 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 O00370 1275 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 EEF2KO00418 725 aaKnown RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 EIF3HO15372 352 aaKnown RBP eCLIP11.06□□□□□ -0.64
CALD1-210ENST00000443197 CDH16O75309 829 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 RARGP13631 454 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 ZNF268Q14587 947 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 CNGA2Q16280 664 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 MGAT5BQ3V5L5 792 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 CRELD2Q6UXH1 353 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 NPNTQ6UXI9 565 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 LRIG3Q6UXM1 1119 aa11.06□□□□□ -0.64
CALD1-210ENST00000443197 CDKL3Q8IVW4 592 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
CALD1-210ENST00000443197 SMCHD1A6NHR9 2005 aa11.05□□□□□ -0.64
CALD1-210ENST00000443197 TCP11X1B4DZS4 312 aa11.05□□□□□ -0.64
CALD1-210ENST00000443197 KBTBD13C9JR72 458 aa11.05□□□□□ -0.64
CALD1-210ENST00000443197 HMGCRP04035 888 aa11.05□□□□□ -0.64
CALD1-210ENST00000443197 SHBGP04278 402 aa11.05□□□□□ -0.64
CALD1-210ENST00000443197 HSPA9P38646 679 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms