RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 THAP9Q9H5L6 903 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 C11orf49Q9H6J7 331 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SCPEP1Q9HB40 452 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CYLDQ9NQC7 956 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TLR9Q9NR96 1032 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 DCAF16Q9NXF7 216 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CRNNQ9UBG3 495 aaPredicted RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 LRWD1Q9UFC0 647 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 PRKAG3Q9UGI9 489 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 TCEAL9Q9UHQ7 104 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 MSRAQ9UJ68 235 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 ZNF229Q9UJW7 825 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 VANGL2Q9ULK5 521 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SOX13Q9UN79 622 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 CAB39Q9Y376 341 aaPredicted RBP2.9□□□□□ -1.95
LIG4-203ENST00000442234 RWDD3Q9Y3V2 267 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SNX9Q9Y5X1 595 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 SPG11Q96JI7 2443 aa2.9□□□□□ -1.95
LIG4-203ENST00000442234 NWD2Q9ULI1 1742 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 DCDC2CA8MYV0 355 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 K7EPI3 171 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PIK3CDO00329 1044 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CHMP2AO43633 222 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 NCK2O43639 380 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CCDC22O60826 627 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 USP2O75604 605 aaPredicted RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 MFN2O95140 757 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 AFPP02771 609 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 CYP1A1P04798 512 aaPredicted RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 GYPCP04921 128 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ALAS1P13196 640 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RPL17P18621 184 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 ATF6P18850 670 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CALML3P27482 149 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CIITAP33076 1130 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 EVI2BP34910 448 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 SOX11P35716 441 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 GJC1P36383 396 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 MAGEA1P43355 309 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 AFMP43652 599 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CLK1P49759 484 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 GNG2P59768 71 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 STX1BP61266 288 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 YWHAGP61981 247 aaKnown RBP eCLIP2.89□□□□□ -1.95
LIG4-203ENST00000442234 FAPQ12884 760 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ITGADQ13349 1161 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 KCNJ8Q15842 424 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 KHDC1Q4VXA5 237 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 TREML2Q5T2D2 321 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 C1orf146Q5VVC0 180 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 AAGABQ6PD74 315 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 IYDQ6PHW0 289 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CORO6Q6QEF8 472 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CXCL17Q6UXB2 119 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 Q6ZNX1 250 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RGS9BPQ6ZS82 235 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ACAD11Q709F0 780 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PIGWQ7Z7B1 504 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ERO1BQ86YB8 467 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 MMAAQ8IVH4 418 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 TDHQ8IZJ6 230 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 REXO1Q8N1G1 1221 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 CENPSQ8N2Z9 138 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 LILRB2Q8N423 598 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 MREGQ8N565 214 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 LINC00301Q8NCQ3 95 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PLBD2Q8NHP8 589 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 HELQQ8TDG4 1101 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 DDI1Q8WTU0 396 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 BCL7CQ8WUZ0 217 aaPredicted RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 ATL1Q8WXF7 558 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 INPP5DQ92835 1189 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PEX13Q92968 403 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 MS4A14Q96JA4 679 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 INPP4AQ96PE3 977 aaPredicted RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 FMO2Q99518 471 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 P2RX7Q99572 595 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 NAP1L4Q99733 375 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 C17orf80Q9BSJ5 609 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ACAT2Q9BWD1 397 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 OSBPL6Q9BZF3 934 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 IMPG2Q9BZV3 1241 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 SLC6A16Q9GZN6 736 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 TRPV6Q9H1D0 765 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 NKX2-4Q9H2Z4 354 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RUBCNLQ9H714 662 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 HPS4Q9NQG7 708 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RNF14Q9UBS8 474 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 KCNH3Q9ULD8 1083 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ERVK-11Q9UQG0 969 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 SIK3Q9Y2K2 1263 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 GPSM3Q9Y4H4 160 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PCDHB2Q9Y5E7 798 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CLIC4Q9Y696 253 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ZNF646O15015 1829 aaPredicted RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 UMODL1Q5DID0 1318 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 LRRK2Q5S007 2527 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 A0A1B0GTH6 734 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 C2orf81A6NN90 581 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CFAP99D6REC4 459 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms