RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CALCOCO2Q13137 446 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 CCDC25Q86WR0 208 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 EMC1Q8N766 993 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 ARMC2Q8NEN0 867 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 BEST2Q8NFU1 509 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 CXorf38Q8TB03 319 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 RUNDC3BQ96NL0 473 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 KATNAL1Q9BW62 490 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 ECT2Q9H8V3 914 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 CYTH4Q9UIA0 394 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 MBLAC1A4D2B0 266 aaPredicted RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 A8MUI8 341 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 KRT10P13645 584 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 OGDHQ02218 1023 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 TAP1Q03518 808 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 KRT17Q04695 432 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 SNX17Q15036 470 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 C11orf91Q3C1V1 193 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 ZNF483Q8TF39 744 aaPredicted RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 NT5C1AQ9BXI3 368 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 KIF9Q9HAQ2 790 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 MTRF1LQ9UGC7 380 aaKnown RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 LRRD1A4D1F6 860 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 PPEF2O14830 753 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 AKR1A1P14550 325 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 CDH5P33151 784 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 PEX19P40855 299 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 INHBEP58166 350 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 PIGHQ14442 188 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SLC29A2Q14542 456 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SMTNL2Q2TAL5 461 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 GSTA5Q7RTV2 222 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 NT5DC4Q86YG4 428 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SNX27Q96L92 541 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 NSRP1Q9H0G5 558 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 LHX5Q9H2C1 402 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ZWILCHQ9H900 591 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 METTL5Q9NRN9 209 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 GAS8O95995 478 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 GNAT1P11488 350 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ZNF252P-AS1Q0IIN9 211 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 NFX1Q12986 1120 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 TWF2Q6IBS0 349 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ANKS1BQ7Z6G8 1248 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 OR6B3Q8NGW1 331 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 CCDC134Q9H6E4 229 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 VRTNQ9H8Y1 702 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 FAM49BQ9NUQ9 324 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 R3HDM2Q9Y2K5 976 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 EME2A4GXA9 379 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SNX3O60493 162 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ERBB2P04626 1255 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 VDRP11473 427 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 MAN1A1P33908 653 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 SLCO1A2P46721 670 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 FAM102AQ5T9C2 384 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 CAPRIN2Q6IMN6 1127 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 ACOT1Q86TX2 421 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 KIF2BQ8N4N8 673 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 JOSD2Q8TAC2 188 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 MICAL1Q8TDZ2 1067 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 EPS8L3Q8TE67 593 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
LIMD1-202ENST00000440097 GJD2Q9UKL4 321 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 TSPAN16Q9UKR8 245 aa14.85□□□□□ -0.03
LIMD1-202ENST00000440097 TRIP12Q14669 1992 aaPredicted RBP14.84□□□□□ -0.03
LIMD1-202ENST00000440097 TRIP11Q15643 1979 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 SMNDC1O75940 238 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIMD1-202ENST00000440097 PGK1P00558 417 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 SLC10A3P09131 477 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 KCNT1Q5JUK3 1230 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 ZDHHC24Q6UX98 284 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 CXCL17Q6UXB2 119 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 USP6NLQ92738 828 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 HAUS1Q96CS2 278 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 MYADML2A6NDP7 307 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 AGTP01019 485 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 HMGCRP04035 888 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 KRT16P08779 473 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 CCND1P24385 295 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 RGS7P49802 495 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 PURAQ00577 322 aaKnown RBP14.84□□□□□ -0.03
LIMD1-202ENST00000440097 SLMAPQ14BN4 828 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 CCDC38Q502W7 563 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 ZNF365Q70YC5 407 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 GRK7Q8WTQ7 553 aa14.84□□□□□ -0.03
LIMD1-202ENST00000440097 MRPL45Q9BRJ2 306 aaKnown RBP14.84□□□□□ -0.03
LIMD1-202ENST00000440097 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms