RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 SDCBP2Q9H190 292 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 ADAM7Q9H2U9 754 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 APOBEC3GQ9HC16 384 aaKnown RBP7.98□□□□□ -1.13
COPS3-203ENST00000439936 SAMSN1Q9NSI8 373 aaKnown RBP7.98□□□□□ -1.13
COPS3-203ENST00000439936 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 RAB20Q9NX57 234 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 DDX43Q9NXZ2 648 aaKnown RBP7.98□□□□□ -1.13
COPS3-203ENST00000439936 AFF4Q9UHB7 1163 aaKnown RBP7.98□□□□□ -1.13
COPS3-203ENST00000439936 DPP7Q9UHL4 492 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 CDH22Q9UJ99 828 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 FBXW11Q9UKB1 542 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 NOTCH4Q99466 2003 aa7.98□□□□□ -1.13
COPS3-203ENST00000439936 TSC2P49815 1807 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 PMM2O15305 246 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ADAM23O75077 832 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 LETM1O95202 739 aaPredicted RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PAPLNO95428 1278 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 IL9P15248 144 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ACAT1P24752 427 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 EPHA4P54764 986 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TNNC1P63316 161 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MYL7Q01449 175 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ITIH3Q06033 890 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TYRO3Q06418 890 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 POU4F2Q12837 409 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 DUSP4Q13115 394 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ZNF699Q32M78 642 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SLC39A12Q504Y0 691 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 HSP90AA4PQ58FG1 418 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ATAT1Q5SQI0 421 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CES5AQ6NT32 575 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CCDC149Q6ZUS6 474 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 GPR149Q86SP6 731 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TCEAL8Q8IYN2 117 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 DCP1BQ8IZD4 617 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 ADGRF2Q8IZF7 708 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 OR6B3Q8NGW1 331 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 LMO3Q8TAP4 145 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SPATA18Q8TC71 538 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SUSD6Q92537 303 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ZNF707Q96C28 371 aaPredicted RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 CNOT6LQ96LI5 555 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PGLYRP2Q96PD5 576 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 LPIN3Q9BQK8 851 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 GRIP2Q9C0E4 1043 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 DNAJC25Q9H1X3 360 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CRISPLD1Q9H336 500 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SNX25Q9H3E2 840 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 THAP9Q9H5L6 903 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CYP4F11Q9HBI6 524 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TMLHEQ9NVH6 421 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ZDHHC7Q9NXF8 308 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 GTF3C4Q9UKN8 822 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MAFFQ9ULX9 164 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 USP15Q9Y4E8 981 aaPredicted RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 NME7Q9Y5B8 376 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.97□□□□□ -1.13
COPS3-203ENST00000439936 MYH10P35580 1976 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MYBPHLA2RUH7 354 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MTMR11A4FU01 709 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 PRRG1O14668 218 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 AFPP02771 609 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 C8AP07357 584 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 HNRNPA1P09651 372 aaKnown RBP eCLIP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PTPN1P18031 435 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PCSK1P29120 753 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 GPC1P35052 558 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MTHFRP42898 656 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MTIF2P46199 727 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 RAP1GAPP47736 663 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 MXI1P50539 228 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TSPY1Q01534 308 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SMAD4Q13485 552 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 SMAD2Q15796 467 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 STX1AQ16623 288 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CCDC142Q17RM4 750 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 WDR44Q5JSH3 913 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 PPM1LQ5SGD2 360 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 XP32Q5T750 250 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 FAM171BQ6P995 826 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CYP26C1Q6V0L0 522 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 TSEN2Q8NCE0 465 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 SLC7A14Q8TBB6 771 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SMG7Q92540 1137 aaKnown RBP7.97□□□□□ -1.13
COPS3-203ENST00000439936 PKMYT1Q99640 499 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 FUCA2Q9BTY2 467 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 BCO2Q9BYV7 579 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 IMPG2Q9BZV3 1241 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SMYD3Q9H7B4 428 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 SFXN1Q9H9B4 322 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 FANCLQ9NW38 375 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 CDH9Q9ULB4 789 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 NFE2L3Q9Y4A8 694 aa7.97□□□□□ -1.13
COPS3-203ENST00000439936 C5orf42Q9H799 3197 aa7.96□□□□□ -1.14
COPS3-203ENST00000439936 A8MXQ7 604 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms