RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 C2orf42Q9NWW7 574 aa14.44□□□□□ -0.1
GARNL3-206ENST00000439286 NXF1Q9UBU9 619 aaKnown RBP14.44□□□□□ -0.1
GARNL3-206ENST00000439286 ARHGAP26Q9UNA1 814 aa14.44□□□□□ -0.1
GARNL3-206ENST00000439286 ATP8B3O60423 1300 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 F8VP50 259 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 SLC9A3R1O14745 358 aaPredicted RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 AKAP3O75969 853 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 ZSCAN22P10073 491 aaPredicted RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 TCF3P15923 654 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 PTPN1P18031 435 aaKnown RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 AFMP43652 599 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 AP3M2P53677 418 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 USP4Q13107 963 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 BIRC3Q13489 604 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 CCDC142Q17RM4 750 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 KNOP1Q1ED39 458 aaKnown RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 EML3Q32P44 896 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 AASDHQ4L235 1098 aaPredicted RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 IL31Q6EBC2 164 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 RPLP0P6Q8NHW5 317 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 DDX1Q92499 740 aaKnown RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 SLC22A12Q96S37 553 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 FBRSL1Q9HCM7 1045 aaKnown RBP14.43□□□□□ -0.1
GARNL3-206ENST00000439286 GCNT4Q9P109 453 aa14.43□□□□□ -0.1
GARNL3-206ENST00000439286 ZNF840PA6NDX5 716 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 LEFTY2O00292 366 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 SLC30A4O14863 429 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 TRIM21P19474 475 aaKnown RBP14.42□□□□□ -0.1
GARNL3-206ENST00000439286 NOP14P78316 857 aaKnown RBP14.42□□□□□ -0.1
GARNL3-206ENST00000439286 IFRD2Q12894 506 aaPredicted RBP14.42□□□□□ -0.1
GARNL3-206ENST00000439286 ELF2Q15723 593 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 PKN3Q6P5Z2 889 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 SYT13Q7L8C5 426 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 DDX42Q86XP3 938 aaKnown RBP eCLIP14.42□□□□□ -0.1
GARNL3-206ENST00000439286 RIN3Q8TB24 985 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 HHIPQ96QV1 700 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 MED10Q9BTT4 135 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 ARRDC1-AS1Q9H2J1 176 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 LINC00597Q9H2U6 94 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 PCDHA7Q9UN72 937 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 MIA3Q5JRA6 1907 aa14.42□□□□□ -0.1
GARNL3-206ENST00000439286 VPS13AQ96RL7 3174 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 RHOBTB1O94844 696 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
GARNL3-206ENST00000439286 APBB3O95704 486 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 STAU1O95793 577 aaKnown RBP14.41□□□□□ -0.1
GARNL3-206ENST00000439286 F13A1P00488 732 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 P4HA1P13674 534 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 KCNA4P22459 653 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 MYL6P60660 151 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 SLC7A9P82251 487 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 DMC1Q14565 340 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 C12orf56Q8IXR9 622 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 NUP93Q8N1F7 819 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 KIAA1958Q8N8K9 716 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 B3GALNT2Q8NCR0 500 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 PDZD8Q8NEN9 1154 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 TNIP3Q96KP6 325 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 TTLL2Q9BWV7 592 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 EXOC1Q9NV70 894 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 MYH11P35749 1972 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 GVINP1Q7Z2Y8 2422 aa14.41□□□□□ -0.1
GARNL3-206ENST00000439286 PDCD11Q14690 1871 aaKnown RBP14.4□□□□□ -0.1
GARNL3-206ENST00000439286 CACNA1IQ9P0X4 2223 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 MBL2P11226 248 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-206ENST00000439286 YWHAQP27348 245 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 CASP1P29466 404 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 DGKEP52429 567 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 USP46P62068 366 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 TAF10Q12962 218 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 CUL4BQ13620 913 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 KBTBD6Q86V97 674 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 C11orf74Q86VG3 221 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 TSTD1Q8NFU3 115 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 ZNF516Q92618 1163 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 FBXO32Q969P5 355 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
GARNL3-206ENST00000439286 ZNF518BQ9C0D4 1074 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 PCDHGA5Q9Y5G8 931 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 CPQQ9Y646 472 aa14.4□□□□□ -0.1
GARNL3-206ENST00000439286 EP300Q09472 2414 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-206ENST00000439286 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 EPN2O95208 641 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 KIF20AO95235 890 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 SLFN14P0C7P3 912 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 ZNF806P0C7X5 589 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 HOXC13P31276 330 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 GBP1P32455 592 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 EHHADHQ08426 723 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 NCOA4Q13772 614 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
GARNL3-206ENST00000439286 C2orf27AQ580R0 203 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
GARNL3-206ENST00000439286 ZC3H10Q96K80 434 aaKnown RBP14.39□□□□□ -0.11
GARNL3-206ENST00000439286 B3GNT5Q9BYG0 378 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms