RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ZPBP2Q6X784 338 aa16.09■□□□□ 0.17
APP-208ENST00000439274 PDIK1LQ8N165 341 aa16.09■□□□□ 0.17
APP-208ENST00000439274 FAXDC2Q96IV6 333 aa16.09■□□□□ 0.17
APP-208ENST00000439274 ACO2Q99798 780 aaKnown RBP16.09■□□□□ 0.17
APP-208ENST00000439274 LBHD1Q9BQE6 289 aaPredicted RBP16.09■□□□□ 0.17
APP-208ENST00000439274 RAB6CQ9H0N0 254 aa16.09■□□□□ 0.17
APP-208ENST00000439274 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
APP-208ENST00000439274 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
APP-208ENST00000439274 CFAP69A5D8W1 941 aa16.09■□□□□ 0.17
APP-208ENST00000439274 AVILO75366 819 aa16.09■□□□□ 0.17
APP-208ENST00000439274 KRT19P08727 400 aa16.09■□□□□ 0.17
APP-208ENST00000439274 PTPN4P29074 926 aa16.09■□□□□ 0.17
APP-208ENST00000439274 AP3M2P53677 418 aa16.09■□□□□ 0.17
APP-208ENST00000439274 HADHQ16836 314 aaKnown RBP16.09■□□□□ 0.17
APP-208ENST00000439274 ZC3H18Q86VM9 953 aaKnown RBP16.09■□□□□ 0.17
APP-208ENST00000439274 BATF3Q9NR55 127 aa16.09■□□□□ 0.17
APP-208ENST00000439274 FBXO6Q9NRD1 293 aaPredicted RBP16.09■□□□□ 0.17
APP-208ENST00000439274 ARL8BQ9NVJ2 186 aa16.09■□□□□ 0.17
APP-208ENST00000439274 HEY2Q9UBP5 337 aa16.09■□□□□ 0.17
APP-208ENST00000439274 HMGXB4Q9UGU5 601 aa16.09■□□□□ 0.17
APP-208ENST00000439274 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
APP-208ENST00000439274 STRIP2Q9ULQ0 834 aa16.09■□□□□ 0.17
APP-208ENST00000439274 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.17
APP-208ENST00000439274 OGTO15294 1046 aa16.08■□□□□ 0.17
APP-208ENST00000439274 LPXNO60711 386 aa16.08■□□□□ 0.17
APP-208ENST00000439274 NEBLO76041 1014 aa16.08■□□□□ 0.17
APP-208ENST00000439274 MT-ND3P03897 115 aa16.08■□□□□ 0.17
APP-208ENST00000439274 PRKCBP05771 671 aa16.08■□□□□ 0.17
APP-208ENST00000439274 RBP3P10745 1247 aa16.08■□□□□ 0.17
APP-208ENST00000439274 MIPP30301 263 aa16.08■□□□□ 0.17
APP-208ENST00000439274 RFC5P40937 340 aa16.08■□□□□ 0.17
APP-208ENST00000439274 STAT5BP51692 787 aa16.08■□□□□ 0.17
APP-208ENST00000439274 FAAP100Q0VG06 881 aa16.08■□□□□ 0.17
APP-208ENST00000439274 DPYSL3Q14195 570 aa16.08■□□□□ 0.17
APP-208ENST00000439274 SH3PXD2AQ5TCZ1 1133 aa16.08■□□□□ 0.17
APP-208ENST00000439274 EEPD1Q7L9B9 569 aa16.08■□□□□ 0.17
APP-208ENST00000439274 XYLT1Q86Y38 959 aa16.08■□□□□ 0.17
APP-208ENST00000439274 TTC13Q8NBP0 860 aa16.08■□□□□ 0.17
APP-208ENST00000439274 RNF149Q8NC42 400 aa16.08■□□□□ 0.17
APP-208ENST00000439274 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.17
APP-208ENST00000439274 TTC17Q96AE7 1141 aa16.08■□□□□ 0.17
APP-208ENST00000439274 NAF1Q96HR8 494 aaKnown RBP16.08■□□□□ 0.17
APP-208ENST00000439274 FAM111AQ96PZ2 611 aa16.08■□□□□ 0.17
APP-208ENST00000439274 AS3MTQ9HBK9 375 aa16.08■□□□□ 0.17
APP-208ENST00000439274 FETUBQ9UGM5 382 aa16.08■□□□□ 0.17
APP-208ENST00000439274 SPDYE16A6NNV3 312 aaPredicted RBP16.08■□□□□ 0.16
APP-208ENST00000439274 KBTBD13C9JR72 458 aa16.08■□□□□ 0.16
APP-208ENST00000439274 PIK3R2O00459 728 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TRAFD1O14545 582 aaPredicted RBP16.08■□□□□ 0.16
APP-208ENST00000439274 ABLIM1O14639 778 aa16.08■□□□□ 0.16
APP-208ENST00000439274 NDC80O14777 642 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TM9SF1O15321 606 aa16.08■□□□□ 0.16
APP-208ENST00000439274 FARP2O94887 1054 aaPredicted RBP16.08■□□□□ 0.16
APP-208ENST00000439274 GJB1P08034 283 aa16.08■□□□□ 0.16
APP-208ENST00000439274 RASSF2P50749 326 aa16.08■□□□□ 0.16
APP-208ENST00000439274 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.16
APP-208ENST00000439274 PTK7Q13308 1070 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TAZQ16635 292 aa16.08■□□□□ 0.16
APP-208ENST00000439274 KBTBD12Q3ZCT8 623 aa16.08■□□□□ 0.16
APP-208ENST00000439274 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TMEM192Q8IY95 271 aa16.08■□□□□ 0.16
APP-208ENST00000439274 SPATA18Q8TC71 538 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TWNKQ96RR1 684 aa16.08■□□□□ 0.16
APP-208ENST00000439274 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
APP-208ENST00000439274 CADM1Q9BY67 442 aaKnown RBP16.08■□□□□ 0.16
APP-208ENST00000439274 SDCBP2Q9H190 292 aa16.08■□□□□ 0.16
APP-208ENST00000439274 NRBP2Q9NSY0 501 aa16.08■□□□□ 0.16
APP-208ENST00000439274 EFR3BQ9Y2G0 817 aa16.08■□□□□ 0.16
APP-208ENST00000439274 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
APP-208ENST00000439274 TCRBV9S1A1TA0A576 114 aa16.07■□□□□ 0.16
APP-208ENST00000439274 B4GALT5O43286 388 aa16.07■□□□□ 0.16
APP-208ENST00000439274 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
APP-208ENST00000439274 FAM155BO75949 473 aa16.07■□□□□ 0.16
APP-208ENST00000439274 UPP2O95045 317 aa16.07■□□□□ 0.16
APP-208ENST00000439274 BGNP21810 368 aa16.07■□□□□ 0.16
APP-208ENST00000439274 POLR2BP30876 1174 aaKnown RBP16.07■□□□□ 0.16
APP-208ENST00000439274 ICAM3P32942 547 aa16.07■□□□□ 0.16
APP-208ENST00000439274 GCLCP48506 637 aaPredicted RBP16.07■□□□□ 0.16
APP-208ENST00000439274 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
APP-208ENST00000439274 LAMTOR4Q0VGL1 99 aa16.07■□□□□ 0.16
APP-208ENST00000439274 MICALL2Q8IY33 904 aa16.07■□□□□ 0.16
APP-208ENST00000439274 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
APP-208ENST00000439274 PEBP4Q96S96 227 aa16.07■□□□□ 0.16
APP-208ENST00000439274 TRIM6Q9C030 488 aaPredicted RBP16.07■□□□□ 0.16
APP-208ENST00000439274 VPS11Q9H270 941 aa16.07■□□□□ 0.16
APP-208ENST00000439274 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
APP-208ENST00000439274 MCF2LO15068 1137 aa16.07■□□□□ 0.16
APP-208ENST00000439274 PYGBP11216 843 aa16.07■□□□□ 0.16
APP-208ENST00000439274 SERPINB3P29508 390 aa16.07■□□□□ 0.16
APP-208ENST00000439274 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
APP-208ENST00000439274 YWHAGP61981 247 aaKnown RBP eCLIP16.07■□□□□ 0.16
APP-208ENST00000439274 GRM1Q13255 1194 aa16.07■□□□□ 0.16
APP-208ENST00000439274 DPH6Q7L8W6 267 aa16.07■□□□□ 0.16
APP-208ENST00000439274 SPDL1Q96EA4 605 aa16.07■□□□□ 0.16
APP-208ENST00000439274 CYTH2Q99418 400 aa16.07■□□□□ 0.16
APP-208ENST00000439274 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
APP-208ENST00000439274 KCNK13Q9HB14 408 aa16.07■□□□□ 0.16
APP-208ENST00000439274 LNPEPQ9UIQ6 1025 aa16.07■□□□□ 0.16
APP-208ENST00000439274 APOC4-APOC2K7ER74 178 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms