RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TMEM196Q5HYL7 178 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 LONP2Q86WA8 852 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 B3GALNT2Q8NCR0 500 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 RIN3Q8TB24 985 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 SH3RF2Q8TEC5 729 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 RMDN1Q96DB5 314 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 C8orf48Q96LL4 319 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 DPEP3Q9H4B8 488 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 USP18Q9UMW8 372 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 SPTBN4Q9H254 2564 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 ANAPC1Q9H1A4 1944 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 OTOL1A6NHN0 477 aaPredicted RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 LRRIQ3A6PVS8 624 aaPredicted RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 PDXKO00764 312 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 TRDMT1O14717 391 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 ATG13O75143 517 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 RPN1P04843 607 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 P4HA1P13674 534 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 PFKLP17858 780 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 CNR2P34972 360 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 PPP3CCP48454 512 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 IFRD2Q12894 506 aaPredicted RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 NR1H3Q13133 447 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 NCOA4Q13772 614 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 SIM2Q14190 667 aaPredicted RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 TDRD10Q5VZ19 366 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 LAIR1Q6GTX8 287 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 SCARA5Q6ZMJ2 495 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 SLITRK1Q96PX8 696 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 P2RY13Q9BPV8 354 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 MED10Q9BTT4 135 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 XYLT2Q9H1B5 865 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 ECT2Q9H8V3 914 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 GCNT4Q9P109 453 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 FRMD4BQ9Y2L6 1034 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 WNT6Q9Y6F9 365 aa19.65■□□□□ 0.74
AC004540.1-201ENST00000439120 HELZP42694 1942 aaKnown RBP19.64■□□□□ 0.74
AC004540.1-201ENST00000439120 OTOGLQ3ZCN5 2332 aa19.64■□□□□ 0.74
AC004540.1-201ENST00000439120 K7ESF4 209 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 CALUO43852 315 aaPredicted RBP19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 NR3C1P04150 777 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 DRD1P21728 446 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 GJA4P35212 333 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 USP46P62068 366 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 DMWDQ09019 674 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 CEP135Q66GS9 1140 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 FSTL4Q6MZW2 842 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 SLC9A9Q8IVB4 645 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 TNIP3Q96KP6 325 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 TTLL2Q9BWV7 592 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 ZNF518BQ9C0D4 1074 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 ARHGAP26Q9UNA1 814 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 SLC8A2Q9UPR5 921 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 HPSEQ9Y251 543 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 NME7Q9Y5B8 376 aa19.64■□□□□ 0.73
AC004540.1-201ENST00000439120 NFATC1O95644 943 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 CDH8P55286 799 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 CLDN10P78369 228 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 PUM1Q14671 1186 aaKnown RBP eCLIP19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 CEP68Q76N32 757 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 PLEKHO2Q8TD55 490 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 B3GNT5Q9BYG0 378 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 SCAND2PQ9GZW5 306 aaPredicted RBP19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 KCTD10Q9H3F6 313 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 VRTNQ9H8Y1 702 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 DMAC2Q9NW81 257 aa19.63■□□□□ 0.73
AC004540.1-201ENST00000439120 ZNF840PA6NDX5 716 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 CLDN5O00501 218 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 RNF40O75150 1001 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 RTN3O95197 1032 aaPredicted RBP19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 EGFP01133 1207 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 C4BPAP04003 597 aaKnown RBP19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 TRIM21P19474 475 aaKnown RBP19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 SDHBP21912 280 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 RAP1GAPP47736 663 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 GALK1P51570 392 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 NDUFA8P51970 172 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 LMNB2Q03252 620 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 TAF10Q12962 218 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 SGSM1Q2NKQ1 1148 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 EML3Q32P44 896 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 FBXO43Q4G163 708 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 DGLUCYQ7Z3D6 616 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 TMEM174Q8WUU8 243 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 CD101Q93033 1021 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 CHFRQ96EP1 664 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 CHAMP1Q96JM3 812 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 C2orf42Q9NWW7 574 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 DMXL1Q9Y485 3027 aa19.62■□□□□ 0.73
AC004540.1-201ENST00000439120 TCF3P15923 654 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 YWHAQP27348 245 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 HOXA6P31267 233 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 PIK3CAP42336 1068 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 CACNA2D1P54289 1103 aa19.61■□□□□ 0.73
AC004540.1-201ENST00000439120 DLG4P78352 724 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms