RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 TSC2P49815 1807 aa16.53■□□□□ 0.24
TSSC4-204ENST00000435795 XPO1O14980 1071 aaKnown RBP16.52■□□□□ 0.24
TSSC4-204ENST00000435795 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
TSSC4-204ENST00000435795 GPD2P43304 727 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
TSSC4-204ENST00000435795 TAF12Q16514 161 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 WDR59Q6PJI9 974 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 PIGZQ86VD9 579 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 ELMOD1Q8N336 334 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 GPR152Q8TDT2 470 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 SPATA17Q96L03 361 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.52■□□□□ 0.24
TSSC4-204ENST00000435795 TMEM30AQ9NV96 361 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
TSSC4-204ENST00000435795 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 TULP2O00295 520 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 CCL16O15467 120 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 XYLBO75191 536 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 RFPL2O75678 378 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 LSM8O95777 96 aaKnown RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 GLP2RO95838 553 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 PLEKP08567 350 aaPredicted RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ATF6P18850 670 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 HOXA9P31269 272 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 EIF4A3P38919 411 aaKnown RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 RGS7P49802 495 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 CDK17Q00537 523 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 SKIV2LQ15477 1246 aaKnown RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ITIH5Q86UX2 942 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 WDTC1Q8N5D0 677 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 C12orf76Q8N812 135 aaPredicted RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 C1orf131Q8NDD1 294 aaKnown RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 SLC35F5Q8WV83 523 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 PPM1EQ8WY54 764 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 CEP295NLQ96MC4 621 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ZNF512Q96ME7 567 aaPredicted RBP16.51■□□□□ 0.23
TSSC4-204ENST00000435795 NOX5Q96PH1 765 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 PCDHB18PQ96TA0 734 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 CHP1Q99653 195 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 SYT11Q9BT88 431 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 LRRC4Q9HBW1 653 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 PNPLA8Q9NP80 782 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ARHGAP20Q9P2F6 1191 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
TSSC4-204ENST00000435795 COL4A4P53420 1690 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 SSU72P8A0A1W2PR75 194 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 DDX3XO00571 662 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■□□□□ 9
TSSC4-204ENST00000435795 CYP1A1P04798 512 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CSH1P0DML2 217 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CSH2P0DML3 217 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CTC1Q2NKJ3 1217 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 PMF1Q6P1K2 205 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 DENND5BQ6ZUT9 1274 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 DNAJB7Q7Z6W7 309 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 NUP93Q8N1F7 819 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 STK32AQ8WU08 396 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 PABPC5Q96DU9 382 aaKnown RBP16.5■□□□□ 0.23
TSSC4-204ENST00000435795 HSFY1Q96LI6 401 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 CCDC42Q96M95 316 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 PIDD1Q9HB75 910 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 ST7Q9NRC1 585 aa16.5■□□□□ 0.23
TSSC4-204ENST00000435795 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
TSSC4-204ENST00000435795 ACADSBP45954 432 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 SLC5A3P53794 718 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 NOMO3P69849 1222 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
TSSC4-204ENST00000435795 CLEC16AQ2KHT3 1053 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 RARS2Q5T160 578 aaKnown RBP16.49■□□□□ 0.23
TSSC4-204ENST00000435795 TMC5Q6UXY8 1006 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 STKLD1Q8NE28 680 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 CPA5Q8WXQ8 436 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 KCTD13Q8WZ19 329 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 PSMG2Q969U7 264 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 SYNCQ9H7C4 482 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 NHEJ1Q9H9Q4 299 aaPredicted RBP16.49■□□□□ 0.23
TSSC4-204ENST00000435795 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 CLEC1BQ9P126 229 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 ADAMTS1Q9UHI8 967 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 CYTH4Q9UIA0 394 aa16.49■□□□□ 0.23
TSSC4-204ENST00000435795 MAGED2Q9UNF1 606 aaPredicted RBP16.49■□□□□ 0.23
TSSC4-204ENST00000435795 FAM170AA1A519 330 aa16.48■□□□□ 0.23
TSSC4-204ENST00000435795 TNFRSF10BO14763 440 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms