RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TJP3O95049 919 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TRAPPC9Q96Q05 1148 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 VPS33BQ9H267 617 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 CNTNAP2Q9UHC6 1331 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM221A6NGB7 291 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 BANF1O75531 89 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 SUN1O94901 812 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 GJB1P08034 283 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 UBA1P22314 1058 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 MMP8P22894 467 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 NFKBIAP25963 317 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ARL2P36404 184 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ITIH4Q14624 930 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ZBED8Q8IZ13 594 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM130Q8N3G9 435 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 BBOF1Q8ND07 529 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 IFT43Q96FT9 208 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ARHGEF3Q9NR81 526 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 DDX18Q9NVP1 670 aaKnown RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM191CA6NGB0 347 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 CCDC160A6NGH7 325 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM191BP0C7N4 346 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 OGDHQ02218 1023 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 PTP4A2Q12974 167 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 LY6KQ17RY6 165 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 WDR78Q5VTH9 848 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 ANKMY2Q8IV38 441 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 RCOR2Q8IZ40 523 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 NLRP4Q96MN2 994 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 GINM1Q9NU53 330 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 STYXL1Q9Y6J8 313 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 LIASO43766 372 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 ADCY3O60266 1144 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 CSDE1O75534 798 aaKnown RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 OAZ1P54368 228 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 SCUBE1Q8IWY4 988 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 VCPIP1Q96JH7 1222 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 SLITRK1Q96PX8 696 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 PCSK1NQ9UHG2 260 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 MCCD1P59942 119 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TGFB2P61812 414 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 IRGCQ6NXR0 463 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 SLC15A3Q8IY34 581 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 RIBC1Q8N443 379 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 TFAP2BQ92481 460 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 GGA3Q9NZ52 723 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
SEMA3F-206ENST00000434342 EPHB2P29323 1055 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 RAP1GAPP47736 663 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 BNIP1Q12981 228 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CFAP157Q5JU67 520 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 SPOCD1Q6ZMY3 1216 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 EMC1Q8N766 993 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 TRAPPC12Q8WVT3 735 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 MPP4Q96JB8 637 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 PCYT2Q99447 389 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 PSMA2P25787 234 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 KLRC2P26717 231 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 HOXD12P35452 270 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 LMNB2Q03252 620 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 STAT4Q14765 748 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 LRRC8CQ8TDW0 803 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 CKAP2Q8WWK9 683 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
SEMA3F-206ENST00000434342 KCNN1Q92952 543 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms