RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ADAM22Q9P0K1 906 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 WDR35Q9P2L0 1181 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 LGALS13Q9UHV8 139 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CPSF3Q9UKF6 684 aaKnown RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 DRG1Q9Y295 367 aaKnown RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 SNX24Q9Y343 169 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CEP83Q9Y592 693 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CSADQ9Y600 493 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 COL1A2P08123 1366 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ANK1P16157 1881 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM191CA6NGB0 347 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM110-MUSTN1A8MSY1 372 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ACKR2O00590 384 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 RASGRF2O14827 1237 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TP73O15350 636 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 RGS16O15492 202 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 CA12O43570 354 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 HBP1O60381 514 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TTC4O95801 387 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ALBP02768 609 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM191BP0C7N4 346 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 GHRP10912 638 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 NID1P14543 1247 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ATICP31939 592 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 IREB2P48200 963 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ATP1A2P50993 1020 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 SLC18A1P54219 525 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 MAGOHP61326 146 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 GUCY1A3Q02108 690 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 VGLL4Q14135 290 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 SLC29A2Q14542 456 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PPP1R7Q15435 360 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 DUOXA2Q1HG44 320 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 CELF3Q5SZQ8 465 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 MPZL3Q6UWV2 235 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 SAPCD2Q86UD0 394 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ERO1BQ86YB8 467 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TDRPQ86YL5 185 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 DHX37Q8IY37 1157 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 CNPY4Q8N129 248 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 AFG1LQ8WV93 481 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 CYFIP2Q96F07 1278 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TTC25Q96NG3 672 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 XPO6Q96QU8 1125 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PI4K2AQ9BTU6 479 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 OSBPL8Q9BZF1 889 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 FZD8Q9H461 694 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 SMARCAD1Q9H4L7 1026 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 MROH8Q9H579 483 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 APOBEC3GQ9HC16 384 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PTPRHQ9HD43 1115 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 ADARB2Q9NS39 739 aaKnown RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 SCHIP1Q9P0W5 487 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-204ENST00000433822 FETUBQ9UGM5 382 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 AGTPBP1Q9UPW5 1226 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 TNFSF13BQ9Y275 285 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
COL17A1-204ENST00000433822 PTPRJQ12913 1337 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TLR3O15455 904 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 MED7O43513 233 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CAND2O75155 1236 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TJP3O95049 919 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 PRKCBP05771 671 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ATF2P15336 505 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TSHRP16473 764 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TCF7P36402 384 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ACOT2P49753 483 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 HIRAP54198 1017 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 IRX3P78415 501 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CNTN2Q02246 1040 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TNFAIP2Q03169 654 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 SFSWAPQ12872 951 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 PPIL2Q13356 520 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 AUHQ13825 339 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 LRP8Q14114 963 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ITIH4Q14624 930 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 STAT4Q14765 748 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TEAD4Q15561 434 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TAZQ16635 292 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 PTPROQ16827 1216 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC142Q17RM4 750 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 LACTB2Q53H82 288 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ODF2Q5BJF6 829 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ZNF484Q5JVG2 852 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC62Q6P9F0 684 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM270Q6UE05 265 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 FASTKD5Q7L8L6 764 aaKnown RBP7.84□□□□□ -1.15
COL17A1-204ENST00000433822 VSIG1Q86XK7 387 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ANKRD13AQ8IZ07 590 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 OR2W6PQ8NHA6 318 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ZNF606Q8WXB4 792 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM143Q96AN5 459 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 CHMP6Q96FZ7 201 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ANKRD36BP1Q96IX9 119 aa7.84□□□□□ -1.15
COL17A1-204ENST00000433822 ZNF317Q96PQ6 595 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms