RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NOP14P78316 857 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CYP4F8P98187 520 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SMARCB1Q12824 385 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 TDGQ13569 410 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 VEPH1Q14D04 833 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM78AQ5JUQ0 283 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 TANGO2Q6ICL3 276 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SASS6Q6UVJ0 657 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 C4orf50Q6ZRC1 276 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 GAREM2Q75VX8 874 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 RTL10Q7L3V2 364 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 RRAGAQ7L523 313 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ITIH5Q86UX2 942 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 NPAS3Q8IXF0 933 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZC3H3Q8IXZ2 948 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 C12orf29Q8N999 325 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 B3GALNT2Q8NCR0 500 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 EHBP1Q8NDI1 1231 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SHKBP1Q8TBC3 707 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 EDAQ92838 391 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 PSMG2Q969U7 264 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 JAKMIP2Q96AA8 810 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CCDC97Q96F63 343 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CALR3Q96L12 384 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 HEXIM2Q96MH2 286 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 TWNKQ96RR1 684 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CYP2S1Q96SQ9 504 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 KCNK16Q96T55 309 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SMG9Q9H0W8 520 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLITRK6Q9H5Y7 841 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 VRTNQ9H8Y1 702 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM49BQ9NUQ9 324 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 IGSF9Q9P2J2 1179 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 EPS15L1Q9UBC2 864 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 HMGXB4Q9UGU5 601 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SORCS3Q9UPU3 1222 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 BRWD1Q9NSI6 2320 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 GREB1Q4ZG55 1949 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 DENND4CQ5VZ89 1909 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CHD7Q9P2D1 2997 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 BEST1O76090 585 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PAPLNO95428 1278 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 GNA14O95837 355 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PDGFBP01127 241 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CALCAP01258 141 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 AFPP02771 609 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CCDC130P13994 396 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 HMGA1P17096 107 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC9A1P19634 815 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC19A1P41440 591 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 MTIF2P46199 727 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 GPC5P78333 572 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 GRM2Q14416 872 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 MAPRE1Q15691 268 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CFAP221Q4G0U5 840 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM31Q5JXX7 168 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 GPR158Q5T848 1215 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TXNDC8Q6A555 127 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CAVIN1Q6NZI2 390 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRIM67Q6ZTA4 783 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PAQR9Q6ZVX9 377 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMC8Q8IU68 726 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CRYBG2Q8N1P7 616 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 MAB21L3Q8N8X9 362 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TTC8Q8TAM2 541 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZSCAN18Q8TBC5 510 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC2A14Q8TDB8 520 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PBXIP1Q96AQ6 731 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CYFIP2Q96F07 1278 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ARID3AQ99856 593 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CRACR2AQ9BSW2 395 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 LRFN3Q9BTN0 628 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 C1QTNF1Q9BXJ1 281 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC46A2Q9BY10 475 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 BCO2Q9BYV7 579 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZNF518BQ9C0D4 1074 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ELOVL4Q9GZR5 314 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZFP14Q9HCL3 533 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PLSCR2Q9NRY7 297 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CISHQ9NSE2 258 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 SAMSN1Q9NSI8 373 aaKnown RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 TMEM63CQ9P1W3 806 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CHORDC1Q9UHD1 332 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 DACH1Q9UI36 760 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 FBXL21Q9UKT6 434 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 CA14Q9ULX7 337 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ASB3Q9Y575 518 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZFP37Q9Y6Q3 630 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 OBSL1O75147 1896 aa6.13□□□□□ -1.43
HMGB3P24-201ENST00000433260 PTPRDP23468 1912 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms