RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PI4KAP42356 2102 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 ANTXRLA6NF34 631 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 LEFTY2O00292 366 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 GABRDO14764 452 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 GARTP22102 1010 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 LARP1BQ659C4 914 aaKnown RBP19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 BRAPQ7Z569 592 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 PIGKQ92643 395 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 MYLPFQ96A32 169 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 CBWD1Q9BRT8 395 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 PCIF1Q9H4Z3 704 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 TRPM5Q9NZQ8 1165 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 STK17AQ9UEE5 414 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 PTPRDP23468 1912 aa19.59■□□□□ 0.73
UPK3BP1-201ENST00000428678 MYMKA6NI61 221 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CDX4O14627 284 aaPredicted RBP19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 ALDH1A2O94788 518 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CEACAM1P13688 526 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CSRP1P21291 193 aaKnown RBP19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 BDNFP23560 247 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 GRIK1P39086 918 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CASP5P51878 434 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 IRX4P78413 519 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 ZXDBP98169 803 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 MYO1EQ12965 1108 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CRY1Q16526 586 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 LMBRD2Q68DH5 695 aaPredicted RBP19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 FAM171BQ6P995 826 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 VSTM1Q6UX27 236 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 FILIP1Q7Z7B0 1213 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 ANKRD36BP1Q96IX9 119 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 SPATA17Q96L03 361 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 ADAM33Q9BZ11 813 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CCDC39Q9UFE4 941 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 CDH9Q9ULB4 789 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 PCDHB13Q9Y5F0 798 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 MYOFQ9NZM1 2061 aa19.58■□□□□ 0.72
UPK3BP1-201ENST00000428678 DMXL2Q8TDJ6 3036 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 WDFY3Q8IZQ1 3526 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 TOP3BO95985 862 aaKnown RBP19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 CYP17A1P05093 508 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 IDEP14735 1019 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 LMO2P25791 158 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 ANXA13P27216 316 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 USP46P62068 366 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 GAB4Q2WGN9 574 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 DENND5BQ6ZUT9 1274 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 RLN3Q8WXF3 142 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 DNAJC19Q96DA6 116 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 HPDLQ96IR7 371 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 CRTAC1Q9NQ79 661 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 WASF3Q9UPY6 502 aa19.57■□□□□ 0.72
UPK3BP1-201ENST00000428678 MYO18AQ92614 2054 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 PCNX2A6NKB5 2137 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 SCAMP3O14828 347 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 MAP3K13O43283 966 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 KLF8O95600 359 aaPredicted RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 ABL1P00519 1130 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 PDGFRBP09619 1106 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 PFKLP17858 780 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 MRPS21P82921 87 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 MAPRE1Q15691 268 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 TMEM92Q6UXU6 159 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 ARMCX6Q7L4S7 300 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 LPCAT2Q7L5N7 544 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 DPH6Q7L8W6 267 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 SFTPA1Q8IWL2 248 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 ALLCQ8N6M5 410 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 KDF1Q8NAX2 398 aaPredicted RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 DEFB124Q8NES8 71 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 KBTBD7Q8WVZ9 684 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 SPACA7Q96KW9 195 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 OLFML3Q9NRN5 406 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 SMPD4Q9NXE4 827 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 BCCIPQ9P287 314 aaKnown RBP eCLIP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 CPQQ9Y646 472 aa19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 FASNP49327 2511 aaKnown RBP19.56■□□□□ 0.72
UPK3BP1-201ENST00000428678 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 SLC9A3R1O14745 358 aaPredicted RBP19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TNNC2P02585 160 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 HNRNPLP14866 589 aaKnown RBP eCLIP19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TIE1P35590 1138 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TXLNAP40222 546 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 MAPK8P45983 427 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 SLC6A11P48066 632 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 ALCAMQ13740 583 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 DHCR24Q15392 516 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TRIM61Q5EBN2 209 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TMEFF1Q8IYR6 380 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 TXNDC5Q8NBS9 432 aaKnown RBP19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 OR5B17Q8NGF7 314 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 OLIG1Q8TAK6 271 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 WHAMMQ8TF30 809 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 PNKPQ96T60 521 aa19.55■□□□□ 0.72
UPK3BP1-201ENST00000428678 SCNM1Q9BWG6 230 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms