RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
VARS2-203ENST00000428017 CSNK1G1Q9HCP0 422 aa16.02■□□□□ 0.16
VARS2-203ENST00000428017 ASAH2Q9NR71 780 aa16.02■□□□□ 0.16
VARS2-203ENST00000428017 FAM50BQ9Y247 325 aa16.02■□□□□ 0.16
VARS2-203ENST00000428017 CDH23Q9H251 3354 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 SLC38A8A6NNN8 435 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 RTN3O95197 1032 aaPredicted RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 GYPCP04921 128 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 CASP14P31944 242 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 SMAD4Q13485 552 aaKnown RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 MEA1Q16626 185 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 PUS10Q3MIT2 529 aaKnown RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 LEXMQ3ZCV2 418 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 PABPC1LQ4VXU2 614 aaKnown RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 TAF3Q5VWG9 929 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 GRASPQ7Z6J2 395 aaPredicted RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 DNAJB7Q7Z6W7 309 aaPredicted RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 SECISBP2LQ93073 1101 aaKnown RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 NECTIN4Q96NY8 510 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 NOX5Q96PH1 765 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 S1PR5Q9H228 398 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 GRPEL1Q9HAV7 217 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 PNPLA8Q9NP80 782 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 THEGQ9P2T0 379 aa16.01■□□□□ 0.15
VARS2-203ENST00000428017 UXTQ9UBK9 157 aaPredicted RBP16.01■□□□□ 0.15
VARS2-203ENST00000428017 ATG2AQ2TAZ0 1938 aa16■□□□□ 0.15
VARS2-203ENST00000428017 XPO1O14980 1071 aaKnown RBP16■□□□□ 0.15
VARS2-203ENST00000428017 BEST1O76090 585 aa16■□□□□ 0.15
VARS2-203ENST00000428017 ADCY5O95622 1261 aa16■□□□□ 0.15
VARS2-203ENST00000428017 FGF19O95750 216 aa16■□□□□ 0.15
VARS2-203ENST00000428017 RHOP08100 348 aa16■□□□□ 0.15
VARS2-203ENST00000428017 MYL4P12829 197 aa16■□□□□ 0.15
VARS2-203ENST00000428017 PDE4CQ08493 712 aa16■□□□□ 0.15
VARS2-203ENST00000428017 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
VARS2-203ENST00000428017 PDZD4Q76G19 769 aaPredicted RBP16■□□□□ 0.15
VARS2-203ENST00000428017 NOP9Q86U38 636 aaKnown RBP16■□□□□ 0.15
VARS2-203ENST00000428017 PIGZQ86VD9 579 aa16■□□□□ 0.15
VARS2-203ENST00000428017 TTC30AQ86WT1 665 aa16■□□□□ 0.15
VARS2-203ENST00000428017 NUP93Q8N1F7 819 aa16■□□□□ 0.15
VARS2-203ENST00000428017 EPS8L1Q8TE68 723 aa16■□□□□ 0.15
VARS2-203ENST00000428017 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
VARS2-203ENST00000428017 UBXN6Q9BZV1 441 aa16■□□□□ 0.15
VARS2-203ENST00000428017 LRRC4Q9HBW1 653 aa16■□□□□ 0.15
VARS2-203ENST00000428017 TMEM30AQ9NV96 361 aa16■□□□□ 0.15
VARS2-203ENST00000428017 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
VARS2-203ENST00000428017 ZNHIT6Q9NWK9 470 aaKnown RBP16■□□□□ 0.15
VARS2-203ENST00000428017 PCDHGC3Q9UN70 934 aa16■□□□□ 0.15
VARS2-203ENST00000428017 USP15Q9Y4E8 981 aaPredicted RBP16■□□□□ 0.15
VARS2-203ENST00000428017 TRANK1O15050 2925 aa16■□□□□ 0.15
VARS2-203ENST00000428017 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 ZNF197O14709 1029 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 PAPLNO95428 1278 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 YWHAQP27348 245 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 SLC5A3P53794 718 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 CDR2Q01850 454 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 DENND1BQ6P3S1 775 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 PASD1Q8IV76 773 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 CNGA4Q8IV77 575 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 SIX6OS1Q8N1H7 587 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 SYN2Q92777 582 aaPredicted RBP15.99■□□□□ 0.15
VARS2-203ENST00000428017 SLITRK1Q96PX8 696 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 FBXO44Q9H4M3 255 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 ST7Q9NRC1 585 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 HCFC1R1Q9NWW0 138 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 COMMD8Q9NX08 183 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 AIPL1Q9NZN9 384 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
VARS2-203ENST00000428017 MRPS23Q9Y3D9 190 aaKnown RBP15.99■□□□□ 0.15
VARS2-203ENST00000428017 PLXNA3P51805 1871 aa15.99■□□□□ 0.15
VARS2-203ENST00000428017 CLUHO75153 1309 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 MBTPS2O43462 519 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 LSM8O95777 96 aaKnown RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 FSHRP23945 695 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 CDC25CP30307 473 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 PLA2G4AP47712 749 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 SNX16P57768 344 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 TFF2Q03403 129 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 KLHL30Q0D2K2 578 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 CBX2Q14781 532 aaPredicted RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 PKDCCQ504Y2 493 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 TDRD12Q587J7 1177 aaKnown RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 PTCRAQ6ISU1 281 aaPredicted RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 TRIM72Q6ZMU5 477 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 HS6ST3Q8IZP7 471 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 TMEM35BQ8NCS4 154 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 ZMIZ2Q8NF64 920 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 OR8K1Q8NGG5 319 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 SLC20A1Q8WUM9 679 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 ANP32BQ92688 251 aaKnown RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 LHX5Q9H2C1 402 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
VARS2-203ENST00000428017 WDR6Q9NNW5 1121 aaKnown RBP15.98■□□□□ 0.15
VARS2-203ENST00000428017 PRDM6Q9NQX0 595 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms