RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 THP07101 528 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 ADORA2AP29274 412 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 BACE1P56817 501 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 PLEKHM3Q6ZWE6 761 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 CCZ1BP86790 482 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CCZ1P86791 482 aaPredicted RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 XPNPEP3Q9NQH7 507 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 TAP1Q03518 808 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 ACOX1Q15067 660 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 IYDQ6PHW0 289 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 GPR152Q8TDT2 470 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 TIPINQ9BVW5 301 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 THAP2Q9H0W7 228 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 GIMAP4Q9NUV9 329 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 DDX43Q9NXZ2 648 aaKnown RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 PTGER2P43116 358 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 RHOAP61586 193 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CAMK2GQ13555 558 aaPredicted RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 ATL2Q8NHH9 583 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 FICDQ9BVA6 458 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 EXOSC4Q9NPD3 245 aaKnown RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 RHOCP08134 193 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 ITGA8P53708 1063 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CXCL9Q07325 125 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 TRIM32Q13049 653 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 PCDHAC2Q9Y5I4 1007 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPG11-202ENST00000427534 PGK1P00558 417 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 ICAM1P05362 532 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CCDC130P13994 396 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 RAD23BP54727 409 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 ANKS6Q68DC2 871 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 CBWD1Q9BRT8 395 aa13.66□□□□□ -0.22
SPG11-202ENST00000427534 TRMT6Q9UJA5 497 aaKnown RBP13.66□□□□□ -0.22
SPG11-202ENST00000427534 IGSF9BQ9UPX0 1349 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 H7C4K7 107 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 CHN1P15882 459 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 SERPINB5P36952 375 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 OXCT1P55809 520 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 BFSP2Q13515 415 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 RELTQ969Z4 430 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 GSSP48637 474 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 NR1I3Q14994 352 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 LPCAT1Q8NF37 534 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 PXMP2Q9NR77 195 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 CDYLQ9Y232 598 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
SPG11-202ENST00000427534 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 EXD1Q8NHP7 514 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 ARMC2Q8NEN0 867 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 STN1Q9H668 368 aaKnown RBP13.65□□□□□ -0.22
SPG11-202ENST00000427534 ZNF556Q9HAH1 456 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 NUDT14O95848 222 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 HPGDP15428 266 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 IL10P22301 178 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
SPG11-202ENST00000427534 HNRNPH2P55795 449 aaKnown RBP13.65□□□□□ -0.22
SPG11-202ENST00000427534 AP2B1P63010 937 aa13.65□□□□□ -0.22
SPG11-202ENST00000427534 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
SPG11-202ENST00000427534 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 PGM1P36871 562 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 GRIK4Q16099 956 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 NIF3L1Q9GZT8 377 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 TMEM8AQ9HCN3 771 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 DMAP1Q9NPF5 467 aaPredicted RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 PADI4Q9UM07 663 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 STX3Q13277 289 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 VEGFAP15692 232 aaPredicted RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 TRPC1P48995 793 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms