RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TTC30AQ86WT1 665 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 C17orf53Q8N3J3 647 aaPredicted RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 OR10T2Q8NGX3 314 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 KIF18AQ8NI77 898 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 ZNF461Q8TAF7 563 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 FEZF2Q8TBJ5 459 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PKMYT1Q99640 499 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 GDF15Q99988 308 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 NCAPGQ9BPX3 1015 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 LPIN3Q9BQK8 851 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 C11orf70Q9BRQ4 267 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 SELENOOQ9BVL4 669 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PNPLA8Q9NP80 782 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 DMAP1Q9NPF5 467 aaPredicted RBP10.89□□□□□ -0.67
MDC1-205ENST00000425072 TMEM51Q9NW97 253 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 COMMD8Q9NX08 183 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 EHD2Q9NZN4 543 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 MTRRQ9UBK8 725 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 JRKLQ9Y4A0 524 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 PAXBP1Q9Y5B6 917 aa10.89□□□□□ -0.67
MDC1-205ENST00000425072 NCANO14594 1321 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C5orf67F2Z3F1 127 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CLDN5O00501 218 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TRIM66O15016 1216 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C1RP00736 705 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 GLI1P08151 1106 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CTSAP10619 480 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CASQ1P31415 396 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 ELF1P32519 619 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 OR1D2P34982 312 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 SCNN1AP37088 669 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 ARPP19P56211 112 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 MAP3K7CLP57077 242 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 RPL10AP62906 217 aaKnown RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 SLC6A3Q01959 620 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 PTP4A2Q12974 167 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 MAMLD1Q13495 774 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TUBB2AQ13885 445 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 ACAP1Q15027 740 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 RAB30Q15771 203 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 RTP2Q5QGT7 225 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C9orf50Q5SZB4 431 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 DNAJC24Q6P3W2 148 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CLEC20AQ6ZU45 233 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 ARCQ7LC44 396 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 PIGZQ86VD9 579 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TMEM173Q86WV6 379 aaPredicted RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 SCUBE3Q8IX30 993 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 SIX6OS1Q8N1H7 587 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C3orf20Q8ND61 904 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 BCL7CQ8WUZ0 217 aaPredicted RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 MYLPFQ96A32 169 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C8orf48Q96LL4 319 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TGS1Q96RS0 853 aaKnown RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 C11orf84Q9BUA3 381 aaPredicted RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 TUBB2BQ9BVA1 445 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TRIM62Q9BVG3 475 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 EMILIN2Q9BXX0 1053 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
MDC1-205ENST00000425072 CNGB3Q9NQW8 809 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 IP6K2Q9UHH9 426 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 TFR2Q9UP52 801 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CDY1Q9Y6F8 540 aa10.88□□□□□ -0.67
MDC1-205ENST00000425072 CTAGE9A4FU28 777 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 TMEM191CA6NGB0 347 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 H0YGN5 161 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 C2CD2LO14523 706 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 BUB1O43683 1085 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 ABLIM3O94929 683 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 MOCS3O95396 460 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 ABL1P00519 1130 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 LCP1P13796 627 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 CYP2F1P24903 491 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 CTNNB1P35222 781 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 SLC1A1P43005 524 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 RGS7P49802 495 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 RAB33AQ14088 237 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 PIGHQ14442 188 aaPredicted RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 PTPN20Q4JDL3 420 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 PRSS55Q6UWB4 352 aaPredicted RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 RTL10Q7L3V2 364 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 XYLT1Q86Y38 959 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 SCML4Q8N228 414 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 TPCN2Q8NHX9 752 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 ZNF564Q8TBZ8 553 aaPredicted RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 MICAL1Q8TDZ2 1067 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 MCRS1Q96EZ8 462 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 B3GALT6Q96L58 329 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 TMEM209Q96SK2 561 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms