RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 PPP1R37O75864 691 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 TMEM191BP0C7N4 346 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 GJB2P29033 226 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 WNT7BP56706 349 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 MYO1EQ12965 1108 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 MAPRE1Q15691 268 aaKnown RBP17.26■□□□□ 0.35
PUDP-203ENST00000424830 CCDC142Q17RM4 750 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 VSTM1Q6UX27 236 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 DYMQ7RTS9 669 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 OSTM1Q86WC4 334 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 DEFB124Q8NES8 71 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 SPATA17Q96L03 361 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 CEP295NLQ96MC4 621 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 TMEM121BQ9BXQ6 578 aaPredicted RBP17.26■□□□□ 0.35
PUDP-203ENST00000424830 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
PUDP-203ENST00000424830 MAGEC2Q9UBF1 373 aaPredicted RBP17.26■□□□□ 0.35
PUDP-203ENST00000424830 DMXL2Q8TDJ6 3036 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 PTPRDP23468 1912 aa17.26■□□□□ 0.35
PUDP-203ENST00000424830 LEFTY2O00292 366 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 SLC9A3R1O14745 358 aaPredicted RBP17.25■□□□□ 0.35
PUDP-203ENST00000424830 GABRDO14764 452 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 TOP3BO95985 862 aaKnown RBP17.25■□□□□ 0.35
PUDP-203ENST00000424830 GAP43P17677 238 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 ANXA13P27216 316 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 GRIK1P39086 918 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 DPP6P42658 865 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 GRIN1Q05586 938 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
PUDP-203ENST00000424830 FAM171BQ6P995 826 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 DENND5BQ6ZUT9 1274 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 SYCP3Q8IZU3 236 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 KIAA1958Q8N8K9 716 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 OLIG1Q8TAK6 271 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 NOC3LQ8WTT2 800 aaKnown RBP17.25■□□□□ 0.35
PUDP-203ENST00000424830 GATA6Q92908 595 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 SYT15Q9BQS2 421 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 MTMR12Q9C0I1 747 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 POLMQ9NP87 494 aaPredicted RBP17.25■□□□□ 0.35
PUDP-203ENST00000424830 PI4KAP42356 2102 aa17.25■□□□□ 0.35
PUDP-203ENST00000424830 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 HCRTO43612 131 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 GCNT3O95395 438 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 CYP17A1P05093 508 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 GARTP22102 1010 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 P2RY2P41231 377 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 MAPK8P45983 427 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 PPP3CCP48454 512 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 PSMC1P62191 440 aaKnown RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 KCNA1Q09470 495 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 BYSLQ13895 437 aaKnown RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 SOWAHAQ2M3V2 549 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 HSF5Q4G112 596 aaPredicted RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 DPH6Q7L8W6 267 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 SYT12Q8IV01 421 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 ALLCQ8N6M5 410 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 TXNDC5Q8NBS9 432 aaKnown RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 CXorf38Q8TB03 319 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 ZCCHC14Q8WYQ9 949 aaKnown RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 PNKPQ96T60 521 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 TBC1D7Q9P0N9 293 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 STK17AQ9UEE5 414 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 CDH9Q9ULB4 789 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 PCDHB13Q9Y5F0 798 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 GON4LQ3T8J9 2241 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 TNRC6BQ9UPQ9 1833 aaKnown RBP17.24■□□□□ 0.35
PUDP-203ENST00000424830 NBEAQ8NFP9 2946 aa17.24■□□□□ 0.35
PUDP-203ENST00000424830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 TRIM66O15016 1216 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 KAT7O95251 611 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 ADH1CP00326 375 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 APODP05090 189 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 BDNFP23560 247 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 EIF2DP41214 584 aaKnown RBP17.23■□□□□ 0.35
PUDP-203ENST00000424830 SLC7A9P82251 487 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 ZXDBP98169 803 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 CYP27A1Q02318 531 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 RESTQ13127 1097 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 DHCR24Q15392 516 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 GAB4Q2WGN9 574 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 SPDYCQ5MJ68 293 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 EOGTQ5NDL2 527 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 KIAA1211LQ6NV74 962 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 TMEM92Q6UXU6 159 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 TMEFF1Q8IYR6 380 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 ZSWIM2Q8NEG5 633 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 RLN3Q8WXF3 142 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 NEUROG3Q9Y4Z2 214 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 CPQQ9Y646 472 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 CACNA1EQ15878 2313 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 PLXND1Q9Y4D7 1925 aa17.23■□□□□ 0.35
PUDP-203ENST00000424830 GOLGA8IPA6NC78 632 aa17.22■□□□□ 0.35
PUDP-203ENST00000424830 GOLGA8JA6NMD2 632 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms