RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 COMTP21964 271 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ETFBP38117 255 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 PPM1LQ5SGD2 360 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CCDC121Q6ZUS5 278 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CTU1Q7Z7A3 348 aaKnown RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ITIH5Q86UX2 942 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ATP6V0D2Q8N8Y2 350 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 GIPC2Q8TF65 315 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ACSF2Q96CM8 615 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SMARCAL1Q9NZC9 954 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 TSPAN16Q9UKR8 245 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 KCNN4O15554 427 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ATG7O95352 703 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MAP3K6O95382 1288 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SLC2A3P11169 496 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 IRX4P78413 519 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 TRIM32Q13049 653 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF177Q13360 481 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 TMED2Q15363 201 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 EMC1Q8N766 993 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SEMA4DQ92854 862 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 TRPV6Q9H1D0 765 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MINDY3Q9H8M7 445 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MYH4Q9Y623 1939 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 UBA6A0AVT1 1052 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.782e-11■■■□□ 15.1
CMSS1-201ENST00000421999 TSPAN1O60635 241 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ENDOD1O94919 500 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 FGBP02675 491 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MT-ND3P03897 115 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 BDNFP23560 247 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 MARSP56192 900 aaKnown RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 WSCD1Q658N2 575 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CES5AQ6NT32 575 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 TSHZ1Q6ZSZ6 1077 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 VSIG1Q86XK7 387 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 USP38Q8NB14 1042 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SLC2A14Q8TDB8 520 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CALR3Q96L12 384 aaKnown RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
CMSS1-201ENST00000421999 GANQ9H2C0 597 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CATSPERBQ9H7T0 1116 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 LAMA4Q16363 1823 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 DOCK2Q92608 1830 aa10.18□□□□□ -0.78
CMSS1-201ENST00000421999 CST8O60676 142 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 IFNAR2P48551 515 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 CCDC137Q6PK04 289 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 MAMDC4Q6UXC1 1216 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 LRRC8DQ7L1W4 858 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 TAS2R42Q7RTR8 314 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 RBM23Q86U06 439 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 FAM118BQ9BPY3 351 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 TRIM56Q9BRZ2 755 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 PTCH2Q9Y6C5 1203 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 XYLBO75191 536 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 APRTP07741 180 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 TUFMP49411 452 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 MCL1Q07820 350 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 WDR59Q6PJI9 974 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 RAB44Q7Z6P3 723 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 DBF4BQ8NFT6 615 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 UCMAQ8WVF2 138 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 BAP1Q92560 729 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 PARD6BQ9BYG5 372 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 PDZD7Q9H5P4 517 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 CERS4Q9HA82 394 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 GOLGA2P5Q9HBQ8 144 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 NUDT5Q9UKK9 219 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 NFU1Q9UMS0 254 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 IPPQ9Y573 584 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 SF3B1O75533 1304 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■■■■ 124.9
CMSS1-201ENST00000421999 DDX60LQ5H9U9 1706 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 PRRC2BQ5JSZ5 2229 aaKnown RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 F5H5T6 163 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 GPC4O75487 556 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 CST3P01034 146 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 GZMAP12544 262 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 GRM5P41594 1212 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 EPHB4P54760 987 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 PCSK7Q16549 785 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 NT5DC4Q86YG4 428 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 C18orf25Q96B23 403 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 SCLYQ96I15 445 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.78
CMSS1-201ENST00000421999 FIS1Q9Y3D6 152 aa10.17□□□□□ -0.78
CMSS1-201ENST00000421999 ESYT3A0FGR9 886 aa10.16□□□□□ -0.78
CMSS1-201ENST00000421999 MOXD2PA6NHM9 499 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms