RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
RARA-205ENST00000420042 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
RARA-205ENST00000420042 PDXKO00764 312 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 KIF20AO95235 890 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 ABL1P00519 1130 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
RARA-205ENST00000420042 SYKP43405 635 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 USP46P62068 366 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 NOP14P78316 857 aaKnown RBP16.1■□□□□ 0.17
RARA-205ENST00000420042 DMWDQ09019 674 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 USP4Q13107 963 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 NR1H3Q13133 447 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 NCOA4Q13772 614 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 SIM2Q14190 667 aaPredicted RBP16.1■□□□□ 0.17
RARA-205ENST00000420042 LPAL2Q16609 132 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 FSTL4Q6MZW2 842 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 SLC9A9Q8IVB4 645 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 B3GALNT2Q8NCR0 500 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 PLEKHO2Q8TD55 490 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 P2RY13Q9BPV8 354 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 KCTD10Q9H3F6 313 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 VRTNQ9H8Y1 702 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 ARHGAP26Q9UNA1 814 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 NME7Q9Y5B8 376 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
RARA-205ENST00000420042 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 HRO43593 1189 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
RARA-205ENST00000420042 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
RARA-205ENST00000420042 NR3C1P04150 777 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 P4HA1P13674 534 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 DRD1P21728 446 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 GJA4P35212 333 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 GALK1P51570 392 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 CDH8P55286 799 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 CLDN10P78369 228 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 PUM1Q14671 1186 aaKnown RBP eCLIP16.09■□□□□ 0.17
RARA-205ENST00000420042 CEP135Q66GS9 1140 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 LAIR1Q6GTX8 287 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 TMEM174Q8WUU8 243 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 TTLL2Q9BWV7 592 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 B3GNT5Q9BYG0 378 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 ZNF518BQ9C0D4 1074 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 C2orf42Q9NWW7 574 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 SLC8A2Q9UPR5 921 aa16.09■□□□□ 0.17
RARA-205ENST00000420042 EP300Q09472 2414 aaPredicted RBP16.08■□□□□ 0.17
RARA-205ENST00000420042 ZNF840PA6NDX5 716 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 CLDN5O00501 218 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 EGFP01133 1207 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 TCF3P15923 654 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 SDHBP21912 280 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 HOXA6P31267 233 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 RAP1GAPP47736 663 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 NDUFA8P51970 172 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 DLG4P78352 724 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 IFRD2Q12894 506 aaPredicted RBP16.08■□□□□ 0.16
RARA-205ENST00000420042 TAF10Q12962 218 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 EML3Q32P44 896 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 FBXO43Q4G163 708 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 SCARA5Q6ZMJ2 495 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 CEP68Q76N32 757 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 CD101Q93033 1021 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
RARA-205ENST00000420042 LINC00597Q9H2U6 94 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 FBRSL1Q9HCM7 1045 aaKnown RBP16.08■□□□□ 0.16
RARA-205ENST00000420042 ZDHHC9Q9Y397 364 aa16.08■□□□□ 0.16
RARA-205ENST00000420042 LEFTY2O00292 366 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 RNF40O75150 1001 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 RTN3O95197 1032 aaPredicted RBP16.07■□□□□ 0.16
RARA-205ENST00000420042 VNN1O95497 513 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 NFATC1O95644 943 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 RETP07949 1114 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 YWHAQP27348 245 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 CACNA2D1P54289 1103 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 LMNB2Q03252 620 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
RARA-205ENST00000420042 RSPO4Q2I0M5 234 aaPredicted RBP16.07■□□□□ 0.16
RARA-205ENST00000420042 PKN3Q6P5Z2 889 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.07■□□□□ 0.16
RARA-205ENST00000420042 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 NUP93Q8N1F7 819 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 TAF4BQ92750 862 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
RARA-205ENST00000420042 FAM237AA0A1B0GTK4 181 aa16.06■□□□□ 0.16
RARA-205ENST00000420042 PRR5-ARHGAP8B1AHC4 643 aa16.06■□□□□ 0.16
RARA-205ENST00000420042 IKBKBO14920 756 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms